| Previous changeset 11:45d2e58bcaf8 (2016-04-04) Next changeset 13:89e9a828de51 (2016-04-04) |
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Commit message:
Uploaded |
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modified:
chipsequtil/map_to_known_genes.py |
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added:
chipsequtil/._map_to_known_genes.py chipsequtil/._map_to_known_genes.xml |
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| diff -r 45d2e58bcaf8 -r 182e829571f7 chipsequtil/._map_to_known_genes.py |
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| Binary file chipsequtil/._map_to_known_genes.py has changed |
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| diff -r 45d2e58bcaf8 -r 182e829571f7 chipsequtil/._map_to_known_genes.xml |
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| Binary file chipsequtil/._map_to_known_genes.xml has changed |
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| diff -r 45d2e58bcaf8 -r 182e829571f7 chipsequtil/map_to_known_genes.py --- a/chipsequtil/map_to_known_genes.py Mon Apr 04 15:05:49 2016 -0400 +++ b/chipsequtil/map_to_known_genes.py Mon Apr 04 15:41:41 2016 -0400 |
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| @@ -199,7 +199,7 @@ if opts.symbol_xref : out_d['geneSymbol'] = symbol_xref_map[gene['name']]['geneSymbol'] peaks_writer.writerow(out_d) - + print "wrote a row." mapped = True # reset map_type @@ -213,7 +213,8 @@ peaks_writer.writerow(out_d) map_stats['intergenic'] += 1 - if peak_output != sys.stdout : + if peak_output != sys.stdout: + print "arrived here." peak_output.close() #if opts.stats_output != sys.stderr : |