Repository 'chipsequtil'
hg clone https://toolshed.g2.bx.psu.edu/repos/alenail/chipsequtil

Changeset 16:4c645d02a428 (2016-04-04)
Previous changeset 15:d7e08e5fa1a7 (2016-04-04) Next changeset 17:4f63a6af2c4b (2016-04-04)
Commit message:
Uploaded
modified:
chipsequtil/map_to_known_genes.py
added:
chipsequtil/._map_to_known_genes.py
chipsequtil/._map_to_known_genes.xml
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diff -r d7e08e5fa1a7 -r 4c645d02a428 chipsequtil/._map_to_known_genes.py
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Binary file chipsequtil/._map_to_known_genes.py has changed
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diff -r d7e08e5fa1a7 -r 4c645d02a428 chipsequtil/._map_to_known_genes.xml
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Binary file chipsequtil/._map_to_known_genes.xml has changed
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diff -r d7e08e5fa1a7 -r 4c645d02a428 chipsequtil/map_to_known_genes.py
--- a/chipsequtil/map_to_known_genes.py Mon Apr 04 15:59:17 2016 -0400
+++ b/chipsequtil/map_to_known_genes.py Mon Apr 04 16:20:07 2016 -0400
[
@@ -120,7 +120,7 @@
         chrom_genes = gene_ref[peak[chr_field]]
 
         if len(chrom_genes) == 0 :
-            sys.stderr.write('WARNING: peak chromosome %s not found in gene reference, skipping: %s\n'%(peak[chr_field],peak))
+            sys.stdout.write('WARNING: peak chromosome %s not found in gene reference, skipping: %s\n'%(peak[chr_field],peak))
             continue
 
         mapped = False