| Previous changeset 28:aec507b81d10 (2016-04-13) Next changeset 30:af2afdf7b4e0 (2016-04-14) |
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Commit message:
Uploaded |
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modified:
chipsequtil/pieplot_macs/pieplots_macs.py chipsequtil/pieplot_macs/tool_dependencies.xml |
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added:
chipsequtil/map_to_known_genes/._map_to_known_genes.py chipsequtil/map_to_known_genes/._map_to_known_genes.xml |
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| diff -r aec507b81d10 -r 5c1e5d771216 chipsequtil/map_to_known_genes/._map_to_known_genes.py |
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| Binary file chipsequtil/map_to_known_genes/._map_to_known_genes.py has changed |
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| diff -r aec507b81d10 -r 5c1e5d771216 chipsequtil/map_to_known_genes/._map_to_known_genes.xml |
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| Binary file chipsequtil/map_to_known_genes/._map_to_known_genes.xml has changed |
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| diff -r aec507b81d10 -r 5c1e5d771216 chipsequtil/pieplot_macs/pieplots_macs.py --- a/chipsequtil/pieplot_macs/pieplots_macs.py Wed Apr 13 18:10:35 2016 -0400 +++ b/chipsequtil/pieplot_macs/pieplots_macs.py Thu Apr 14 09:35:53 2016 -0400 |
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| @@ -17,6 +17,7 @@ __author__='Renan Escalante' __email__='renanec@mit.edu' +import pandas as pd import matplotlib matplotlib.use('pdf') from matplotlib import pyplot as plt @@ -24,7 +25,6 @@ matplotlib.rcParams['font.size']=14 import sys from argparse import ArgumentParser -import pandas as pd def map_peaks(gene,peak,outfile,macsFlag): genefile = open(gene, 'r') |
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| diff -r aec507b81d10 -r 5c1e5d771216 chipsequtil/pieplot_macs/tool_dependencies.xml --- a/chipsequtil/pieplot_macs/tool_dependencies.xml Wed Apr 13 18:10:35 2016 -0400 +++ b/chipsequtil/pieplot_macs/tool_dependencies.xml Thu Apr 14 09:35:53 2016 -0400 |
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| @@ -1,9 +1,9 @@ <?xml version="1.0"?> <tool_dependency> - <package name="pandas" version="0.14.1"> - <repository changeset_revision="ac9f317487a9" name="package_pandas_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> - <package name="matplotlib" version="1.4"> - <repository changeset_revision="f7424e1cf115" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> + <package name="pandas" version="0.14.1"> + <repository changeset_revision="ac9f317487a9" name="package_pandas_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> + <package name="matplotlib" version="1.4"> + <repository changeset_revision="f7424e1cf115" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> </tool_dependency> |