| Previous changeset 30:af2afdf7b4e0 (2016-04-14) Next changeset 32:df6cf6d5f766 (2016-04-14) |
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Commit message:
Uploaded |
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added:
chipsequtil/map_to_known_genes/._map_to_known_genes.py chipsequtil/map_to_known_genes/._map_to_known_genes.xml chipsequtil/tool_dependencies.xml |
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removed:
chipsequtil/map_to_known_genes/tool_dependencies.xml chipsequtil/pieplot_macs/tool_dependencies.xml |
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| diff -r af2afdf7b4e0 -r 9c68f2d9f236 chipsequtil/map_to_known_genes/._map_to_known_genes.py |
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| Binary file chipsequtil/map_to_known_genes/._map_to_known_genes.py has changed |
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| diff -r af2afdf7b4e0 -r 9c68f2d9f236 chipsequtil/map_to_known_genes/._map_to_known_genes.xml |
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| Binary file chipsequtil/map_to_known_genes/._map_to_known_genes.xml has changed |
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| diff -r af2afdf7b4e0 -r 9c68f2d9f236 chipsequtil/map_to_known_genes/tool_dependencies.xml --- a/chipsequtil/map_to_known_genes/tool_dependencies.xml Thu Apr 14 09:36:01 2016 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
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| @@ -1,17 +0,0 @@ -<?xml version="1.0"?> -<tool_dependency> - <package name="chipsequtil" version="1.0"> - <install version="1.0"> - <actions> - <action type="download_by_url">https://github.com/fraenkel-lab/chipsequtil/archive/master.zip</action> - <action type="shell_command">cp org_settings.cfg src/chipsequtil/</action> - <action type="shell_command">python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action> - <action type="set_environment"> - <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> - <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable> - </action> - </actions> - </install> - <readme></readme> - </package> -</tool_dependency> |
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| diff -r af2afdf7b4e0 -r 9c68f2d9f236 chipsequtil/pieplot_macs/tool_dependencies.xml --- a/chipsequtil/pieplot_macs/tool_dependencies.xml Thu Apr 14 09:36:01 2016 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
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| @@ -1,9 +0,0 @@ -<?xml version="1.0"?> -<tool_dependency> - <package name="pandas" version="0.14.1"> - <repository changeset_revision="ac9f317487a9" name="package_pandas_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> - <package name="matplotlib" version="1.4"> - <repository changeset_revision="f7424e1cf115" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> -</tool_dependency> |
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| diff -r af2afdf7b4e0 -r 9c68f2d9f236 chipsequtil/tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/chipsequtil/tool_dependencies.xml Thu Apr 14 09:44:56 2016 -0400 |
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| @@ -0,0 +1,23 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="chipsequtil" version="1.0"> + <install version="1.0"> + <actions> + <action type="download_by_url">https://github.com/fraenkel-lab/chipsequtil/archive/master.zip</action> + <action type="shell_command">cp org_settings.cfg src/chipsequtil/</action> + <action type="shell_command">python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action> + <action type="set_environment"> + <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> + <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> + </action> + </actions> + </install> + <readme /> + </package> + <package name="pandas" version="0.14.1"> + <repository changeset_revision="ac9f317487a9" name="package_pandas_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> + <package name="matplotlib" version="1.4"> + <repository changeset_revision="f7424e1cf115" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> +</tool_dependency> |