| Previous changeset 9:1c6c8591f760 (2016-04-04) Next changeset 11:45d2e58bcaf8 (2016-04-04) |
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Commit message:
Uploaded |
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modified:
chipsequtil/map_to_known_genes.xml |
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added:
chipsequtil/._map_to_known_genes.py chipsequtil/._map_to_known_genes.xml |
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| diff -r 1c6c8591f760 -r a92644537c7d chipsequtil/._map_to_known_genes.py |
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| Binary file chipsequtil/._map_to_known_genes.py has changed |
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| diff -r 1c6c8591f760 -r a92644537c7d chipsequtil/._map_to_known_genes.xml |
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| Binary file chipsequtil/._map_to_known_genes.xml has changed |
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| diff -r 1c6c8591f760 -r a92644537c7d chipsequtil/map_to_known_genes.xml --- a/chipsequtil/map_to_known_genes.xml Mon Apr 04 15:02:08 2016 -0400 +++ b/chipsequtil/map_to_known_genes.xml Mon Apr 04 15:05:42 2016 -0400 |
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| @@ -10,10 +10,10 @@ <command interpreter="python"> map_to_known_genes.py $tss + --peaks-format=$peaks_fmt --upstream-window=$upst_win --downstream-window=$dnst_win - --map-output=$peaksOutput - --peaks-format=$peaks_fmt + --map-output="$peaksOutput" $detail $intergenic $knownGeneFile $knownGeneRef $macsPeaksFile @@ -38,7 +38,7 @@ <param name="intergenic" checked="false" label="Write intergenic peaks to the gene file as well with None as gene ID" type="boolean" truevalue="--intergenic" falsevalue="" help="" /> </inputs> <outputs> - <data format="txt" hidden="false" name="peaksOutput"/> + <data name="peaksOutput" format="txt" hidden="false" /> </outputs> <help></help> </tool> |