Repository 'bwa_wrappers'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers

Changeset 3:b4427dbb6ced (2014-01-16)
Previous changeset 2:24fa4e22021a (2013-12-17)
Commit message:
Convert tool to use $GALAXY_SLOTS if available.
modified:
bwa_color_wrapper.xml
bwa_wrapper.xml
b
diff -r 24fa4e22021a -r b4427dbb6ced bwa_color_wrapper.xml
--- a/bwa_color_wrapper.xml Tue Dec 17 09:20:58 2013 -0500
+++ b/bwa_color_wrapper.xml Thu Jan 16 13:11:51 2014 -0500
b
@@ -6,7 +6,7 @@
   <parallelism method="basic"></parallelism>
   <command interpreter="python">
     bwa_wrapper.py 
-      --threads="4"
+      --threads="\${GALAXY_SLOTS:-4}"
       --color-space
 
       ## reference source
b
diff -r 24fa4e22021a -r b4427dbb6ced bwa_wrapper.xml
--- a/bwa_wrapper.xml Tue Dec 17 09:20:58 2013 -0500
+++ b/bwa_wrapper.xml Thu Jan 16 13:11:51 2014 -0500
b
@@ -6,7 +6,7 @@
   <parallelism method="basic"></parallelism>
   <command interpreter="python">
     bwa_wrapper.py 
-      --threads="4"
+      --threads="\${GALAXY_SLOTS:-4}"
 
       #if $input1.ext == "fastqillumina":
             --illumina1.3