Repository 'staramr'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/staramr

Changeset 2:d0a2e0a9c853 (2025-02-27)
Previous changeset 1:9e8cf8dd6955 (2025-02-10) Next changeset 3:59d308975e63 (2025-03-20)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 9688e265b7b8407c3732b96318b56b2482a9cd98
modified:
staramr_search.xml
b
diff -r 9e8cf8dd6955 -r d0a2e0a9c853 staramr_search.xml
--- a/staramr_search.xml Mon Feb 10 19:23:20 2025 +0000
+++ b/staramr_search.xml Thu Feb 27 16:29:20 2025 +0000
b
@@ -2,7 +2,7 @@
     <description>Scans genome assemblies against the ResFinder, PlasmidFinder, and PointFinder databases searching for AMR genes</description>
     <macros>
         <token name="@TOOL_VERSION@">0.11.0</token>
-        <token name="@VERSION_SUFFIX@">0</token>
+        <token name="@VERSION_SUFFIX@">1</token>
         <token name="@PROFILE@">22.05</token>
         <xml name="element_assert" token_name="" token_text="">
             <element name="@NAME@">
@@ -98,9 +98,9 @@
     --pointfinder-organism '${pointfinder_organism}'
 #end if
 
-$named_genomes &&
+$named_genomes
 #if str($hide_db_build) == 'true':
-    rm -r resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502
+    && rm -r resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502
 #end if
     ]]></command>
     <inputs>