Repository 'duplex'
hg clone https://toolshed.g2.bx.psu.edu/repos/nick/duplex

Changeset 3:aedbdf8ce1af (2015-12-08)
Previous changeset 2:ba2a53b970ca (2015-11-24) Next changeset 4:7f513b9b1b1e (2015-12-21)
Commit message:
planemo upload commit 670b3282d2c120882b956ad617e61369467fb0fe
modified:
align_families.xml
b
diff -r ba2a53b970ca -r aedbdf8ce1af align_families.xml
--- a/align_families.xml Tue Nov 24 21:22:29 2015 -0500
+++ b/align_families.xml Tue Dec 08 08:59:27 2015 -0500
b
@@ -6,7 +6,7 @@
     <requirement type="package" version="0.2">duplex</requirement>
     <requirement type="set_environment">DUPLEX_DIR</requirement>
   </requirements>
-  <command detect_errors="exit_code">python \$DUPLEX_DIR/align_families.py $input &gt; $output
+  <command detect_errors="exit_code">python \$DUPLEX_DIR/align_families.py -p \${GALAXY_SLOTS:-1} $input &gt; $output
   </command>
   <inputs>
     <param name="input" type="data" format="tabular" label="Input reads" help="with barcodes, grouped by family"/>