Repository 'data_manager_fetch_refseq'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/data_manager_fetch_refseq

Changeset 2:5d2ef93c6314 (2019-11-28)
Previous changeset 1:937f167631b1 (2019-01-13) Next changeset 3:f1e545aa76c7 (2020-04-19)
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
modified:
data_manager/fetch_refseq.xml
b
diff -r 937f167631b1 -r 5d2ef93c6314 data_manager/fetch_refseq.xml
--- a/data_manager/fetch_refseq.xml Sun Jan 13 09:26:57 2019 -0500
+++ b/data_manager/fetch_refseq.xml Thu Nov 28 15:47:16 2019 -0500
[
@@ -1,11 +1,11 @@
-<tool id="data_manager_fetch_refseq" name="RefSeq data manager" version="0.0.18" tool_type="manage_data">
+<tool id="data_manager_fetch_refseq" name="RefSeq data manager" version="0.0.19" tool_type="manage_data" profile="19.05">
     <description>Fetch FASTA data from NCBI RefSeq and update all_fasta data table</description>
     <requirements>
-        <requirement type="package">python</requirement>
-        <requirement type="package">requests</requirement>
+        <requirement type="package" version="3.7">python</requirement>
+        <requirement type="package" version="2.22.0">requests</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-    python $__tool_directory__/fetch_refseq.py
+    python '$__tool_directory__/fetch_refseq.py'
       #if str( $advanced.advanced_selector ) == 'advanced':
         ${advanced.compress}
       #end if
@@ -65,7 +65,6 @@
                 <assert_contents>
                     <has_text text="2018-03-14"/>
                     <has_text text="refseq_plastid"/>
-                    <has_text text="/refseq_plastid."/>
                 </assert_contents>
             </output>
         </test>
@@ -79,7 +78,6 @@
                 <assert_contents>
                     <has_text text="2018-03-14"/>
                     <has_text text="refseq_plastid"/>
-                    <has_text text="/refseq_plastid."/>
                 </assert_contents>
             </output>
         </test>