Galaxy |

Repository clc_assembly_cell

Name: clc_assembly_cell

Owner: peterjc

Synopsis: Galaxy wrapper for the CLC Assembly Cell suite from CLCBio

Detailed description:

This is a wrapper for the commercial "CLC Assembly Cell" suite from CLCBio which
includes a de novo assembler and read mapper.

http://www.clcbio.com/products/clc-assembly-cell/

Content homepage: https://github.com/peterjc/pico_galaxy/tree/master/tools/clc_assembly_cell

Development repository: https://github.com/peterjc/pico_galaxy/tree/master/tools/clc_assembly_cell

Link to this repository: https://toolshed.g2.bx.psu.edu/view/peterjc/clc_assembly_cell/31a9169b6222

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/peterjc/clc_assembly_cell

Type: unrestricted

Revision: 5:31a9169b6222

This revision can be installed: True

Times cloned / installed: 824

Tool dependencies - repository tools require handling of these dependencies
Name	Version	Type
samtools	0.1.19	package

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
CLC Mapper View tool metadata	Maps reads giving a SAM/BAM file	0.0.7	16.01
CLC assembler View tool metadata	Assembles reads giving a FASTA file	0.0.7	16.01