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Repository ct_build_cell_ontology_dict
Name: ct_build_cell_ontology_dict
Owner: ebi-gxa
Synopsis: Wrapper for the cell-types-analysis tool suite: Cell types - build cell ontology map
A suite of scripts for analysis of scRNA-seq cell type classification tool outputs. These scripts can be used both for evaluating the existing methods by running pipelines on labelled data and for analysing predicted labels for novel data sets.
Development repository: https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/ebi-gxa/ct_build_cell_ontology_dict/512b239a11ad
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/ct_build_cell_ontology_dict
Type: unrestricted
Revision: 5:512b239a11ad
This revision can be installed: True
Times cloned / installed: 396

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Create a mapping from labels to CL terms 1.1.1+galaxy0 18.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA
Statistics - Tools for generating statistics