| Process raw duplex reads into duplex consensus reads without the use of a reference sequence. Published in Genome Biology as Stoler et al. 2016: http://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-1039-4 |
| Name | Version | Type | |
|---|---|---|---|
| bowtie2 | 2.1.0 | package | |
| duplex | 0.6 | package | |
| mafft | 7.221 | package | |
| networkx | 1.9 | package | |
| samtools | 0.1.18 | package | |
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| of duplex sequencing reads | 0.6 | any | |
| from duplex sequencing alignments | 0.6 | any | |
| of duplex sequencing reads | 0.6 | any | |
| of duplex sequencing reads | 0.6 | any | |