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Repository samtools_bam_to_cram

Name: samtools_bam_to_cram

Owner: iuc

Synopsis: Converts alignments in BAM format to CRAM format.

Detailed description:

This tool uses the SAMtools toolkit to convert BAM to CRAM files. The CRAM
format does additional compression relative to the reference genome which
makes the compression more efficient in terms of file size.

Content homepage: https://samtools.github.io/

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/bam_to_cram

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/samtools_bam_to_cram/c2eda9a95b01

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/samtools_bam_to_cram

Type: unrestricted

Revision: 5:c2eda9a95b01

This revision can be installed: True

Times cloned / installed: 666

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
samtools BAM to CRAM View tool metadata	convert BAM alignments to CRAM format	1.13	20.05