| Contains a tool that takes a list of called peaks on both strands and produces a list of matched pairs and a list of unmatched orphans. Nuclease stops (peaks) are expected to be on both strands at a fixed distance in the 5’ direction from the site of crosslinking. By pairing peaks within an empirically imposed distance, false positive peaks can be removed. It can also specify the point of crosslinking. |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/cwpair2
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| find matched pairs and unmatched orphans | 1.1.1 | 16.01 | |