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Repository megan_sam2rma

Name: megan_sam2rma

Owner: iuc

Synopsis: MEGAN: Generate a MEGAN rma6 file tool from the megan suite

Detailed description:

MEGAN Community Edition - Interactive exploration and analysis of large-scale microbiome sequencing data. MEGAN
is a tool for studying the taxonomic content of a set of DNA reads, typically collected in a metagenomics project.
In a preprocessing step, a sequence alignment of all reads against a suitable database of reference DNA or protein
sequences must be performed to produce an input file for the program. MEGAN is suitable for DNA reads (metagenome
data), RNA reads (metatranscriptome data), peptide sequences (metaproteomics data) and, using a suitable synonyms
file that maps SILVA ids to taxon ids, for 16S rRNA data (amplicon sequencing).

Content homepage: https://github.com/husonlab/megan-ce

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/megan

Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/megan_sam2rma/ef0443c0eaba

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/megan_sam2rma

Type: unrestricted

Revision: 1:ef0443c0eaba

This revision can be installed: True

Times cloned / installed: 135