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Repository salsa
Name: salsa
Owner: iuc
Synopsis: A tool to scaffold long read assemblies with Hi-C
Salsa2 combines Hi-C linkage information with the ambiguous-edge information from a genome assembly graph to better resolve unitig orientations
Content homepage: https://github.com/marbl/SALSA
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/salsa2
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/salsa/f77f7a7f3b83
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/salsa
Type: unrestricted
Revision: 3:f77f7a7f3b83
This revision can be installed: True
Times cloned / installed: 360

Contents of this repository

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Name Description Version Minimum Galaxy Version
scaffold long read assemblies with Hi-C 2.3+galaxy2 20.01

Categories
Assembly - Tools for working with assemblies