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Repository lcmsmatching

Name: lcmsmatching

Owner: prog

Synopsis: [Metabolomics][W4M][LC-MS] Annotate LCMS spectrum using an in-house spectra database.

Detailed description:

Part of the W4M project (http://workflow4metabolomics.org). Annotate LCMS spectrum using an in-house spectra database, provided as a TSV file. Two algorithms are proposed, a simple matching on MZ and RT values, and a more complex one that makes sure for each candidate that its precursor peak is matched.

Content homepage: http://workflow4metabolomics.org

Development repository: https://github.com/workflow4metabolomics/lcmsmatching.git

Link to this repository: https://toolshed.g2.bx.psu.edu/view/prog/lcmsmatching/f86fec07f392

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/prog/lcmsmatching

Type: unrestricted

Revision: 6:f86fec07f392

This revision can be installed: True

Times cloned / installed: 657

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
LCMS matching View tool metadata	Annotation of LCMS peaks using matching on a in-house spectra database or on PeakForest spectra database.	4.0.2	18.05