Repository revision
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Repository data_manager_bowtie_index_builder
Name: data_manager_bowtie_index_builder
Owner: iuc
Synopsis: Data Manager for building bowtie indexes
Bowtie is an ultrafast, memory-efficient short read aligner. It
aligns short DNA sequences (reads) to the human genome at a rate of over 25 million
35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to
keep its memory footprint small: typically about 2.2 GB for the human genome (2.9
GB for paired-end).
Content homepage: http://bowtie-bio.sourceforge.net/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie_index_builder
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_bowtie_index_builder/35c1e3785c90
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/data_manager_bowtie_index_builder
Type: unrestricted
Revision: 1:35c1e3785c90
This revision can be installed: True
Times cloned / installed: 2656
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_bowtie_0_12_7 revision 9f9f38617a98 owned by devteam

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
bowtie 0.12.7 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
builder 0.0.2 any
builder 0.0.2 any

Data Managers
Name Version Data Tables
bowtie_color_space_index_builder 0.0.1 bowtie_indexes_color
bowtie_index_builder 0.0.1 bowtie_indexes

Categories
Data Managers - Utilities for Managing Galaxy's built-in data cache