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Repository samtools_depad
Owner: peterjc
Synopsis: Re-align a SAM/BAM file with a padded reference (using samtools depad)
Runs "samtools depad" to remap a SAM/BAM file using a padded reference (with
gap characters) giving a new BAM file using an unpadded (ungapped) reference.
Content homepage:
Type: unrestricted
Revision: 3:588c6ce25867
This revision can be installed: True
Times cloned / installed: 325
Dependencies of this repository

Repository package_samtools_0_1_19 revision c9bd782f5342 owned by iuc

Name Version Type
samtools 0.1.19 package

Contents of this repository

Name Description Version Minimum Galaxy Version
samtools depad 0.0.5 any

Assembly - Tools for working with assemblies
SAM - Tools for manipulating alignments in the SAM format