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Repository gecko
Name: gecko
Owner: bitlab
Synopsis: A pairwise genome comparison software for the detection of High-scoring Segment Pairs
GECKO (GEnome Comparison with K-mers Out-of-core) is a fast, modular application designed to identify collections of High-scoring Segment Pairs in a pairwise genome comparisons. By employing novel filtering and data storing strategies, it is able to compare genome-sized sequences in less time.
Content homepage: https://chirimoyo.ac.uma.es/bitlab/portfolio/gecko/
Development repository: https://github.com/Bitlab-UMA/gecko
Link to this repository: https://toolshed.g2.bx.psu.edu/view/bitlab/gecko/7249f6c19612
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bitlab/gecko
Type: unrestricted
Revision: 12:7249f6c19612
This revision can be installed: True
Times cloned / installed: 309

Contents of this repository

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Name Description Version Minimum Galaxy Version
Extract alignments from a binary Frags file 1.0.0 16.01
A pairwise genome comparison software for the detection of High-scoring Segment Pairs 1.0.1 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis