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Repository checkformat

Name: checkformat

Owner: ethevenot

Synopsis: [W4M][Metabolomics][LC-MS][GC-MS][NMR] Checks the formats of the dataMatrix, sampleMetadata, and variableMetadata files.

Detailed description:

For all post-processing steps of the peak table, W4M uses a 3 table format for the data and metadata. This module therefore checks that the formats of the 3 files "dataMatrix.tsv", "sampleMetadata.tsv", and "variableMetadata.tsv" are correct. It can be used before any post-processing step (such as normalization or statistical analysis). Potential warnings or errors in the formats are returned in the "information.txt" output file.

Content homepage: http://workflow4metabolomics.org

Development repository: https://github.com/workflow4metabolomics/checkformat.git

Link to this repository: https://toolshed.g2.bx.psu.edu/view/ethevenot/checkformat/e7c5811ec12f

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ethevenot/checkformat

Type: unrestricted

Revision: 5:e7c5811ec12f

This revision can be installed: True

Times cloned / installed: 793

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Check Format View tool metadata	Checking/formatting the sample and variable names of the dataMatrix, sampleMetadata, and variableMetadata files	3.0.0	16.01