Repository minfi_pipeline
Name: minfi_pipeline
Owner: nturaga
Synopsis: Wrapper for minfi tool: Minfi pipeline
Minfi package version 1.16.0, Analyze illumina human methyaltion 450K arrays
Content homepage: http://bioconductor.org/packages/release/bioc/html/minfi.html
Link to this repository: https://toolshed.g2.bx.psu.edu/view/nturaga/minfi_pipeline/a78f84fc4873
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/nturaga/minfi_pipeline
Type: unrestricted
Revision: 1:a78f84fc4873
This revision can be installed: True
Times cloned / installed: 398
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_libcurl_7_35 revision 0d934b13250c owned by iuc (prior install required)
Repository package_r_3_2_1 revision d9f7d84125b7 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_atlas_3_10 revision 98c017ec230d owned by iuc (prior install required)
Repository package_readline_6_3 revision ca1a9400d4e1 owned by iuc (prior install required)
Repository package_libpng_1_6_7 revision 588666932a32 owned by iuc (prior install required)
Repository package_cairo_1_12_14 revision 0a73735c3161 owned by iuc (prior install required)
Repository package_pixman_0_32_6 revision 06f701aa92e2 owned by iuc (prior install required)
Repository package_freetype_2_5_2 revision 1e86d1cf79a4 owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_fontconfig_2_11_1 revision d88d844df0cb owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_pixman_0_32_4 revision 32ff063c4de8 owned by iuc (prior install required)
Repository package_libpng_1_6_7 revision 588666932a32 owned by iuc (prior install required)
Repository package_freetype_2_5_2 revision 1e86d1cf79a4 owned by iuc (prior install required)
Repository package_fontconfig_2_11_1 revision d88d844df0cb owned by iuc (prior install required)
Repository package_libpng_1_6_7 revision 588666932a32 owned by iuc (prior install required)
Repository package_libpng_1_6_7 revision 588666932a32 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_libpng_1_6_7 revision 588666932a32 owned by iuc (prior install required)
Repository package_freetype_2_5_2 revision 1e86d1cf79a4 owned by iuc (prior install required)
Repository package_libxml2_2_9_1 revision 45b16a3ab504 owned by iuc (prior install required)

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
R 3.2.1 package
minfi 1.16.0 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
to Analayze Illumina 450k data 1.0 any

Categories
Epigenetics - Tools for analyzing Epigenetic/Epigenomic datasets