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Repository blockbuster
Name: blockbuster
Owner: rnateam
Synopsis: Blockbuster detects blocks of overlapping reads using a gaussian-distribution approach.
Once short read sequences are mapped to a reference genome, one will face the problem of dividing consecutive reads into blocks to detect specific expression patterns. Due to biological variability and sequencing inaccuracies, the read arrangement does not always show exact block boundaries. The blockbuster tool automatically assigns reads to blocks and gives a unique chance to actually see the different origins where the short reads come from.  http://hoffmann.bioinf.uni-leipzig.de/LIFE/blockbuster.html
Type: unrestricted
Revision: 3:7c7ff7a3503f
This revision can be installed: True
Times cloned / installed: 444
Dependencies of this repository

Name Version Type
blockbuster 0.0.1.1 package

Contents of this repository

Name Description Version Minimum Galaxy Version
detects blocks of overlapping reads using a gaussian-distribution approach 0.1.2 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis