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Repository intarna
Name: intarna
Owner: rnateam
Synopsis: Efficient RNA-RNA interaction prediction incorporating accessibility and seeding of interaction sites.
During the last few years, several new small regulatory RNAs (sRNAs) have been discovered in bacteria.
Most of them act as post-transcriptional regulators by base pairing to a target mRNA, causing translational
repression or activation, or mRNA degradation. Numerous sRNAs have already been identified, but the number
of experimentally verified targets is considerably lower. Consequently, computational target
prediction is in great demand. Many existing target prediction programs neglect the accessibility of target
sites and the existence of a seed, while other approaches are either specialized to certain types of RNAs or too
slow for genome-wide searches.
Type: unrestricted
Revision: 15:0377acb3f91b
This revision can be installed: True
Times cloned / installed: 1247

Contents of this repository

Name Description Version Minimum Galaxy Version
Efficient RNA-RNA interaction prediction incorporating accessibility and seeding of interaction sites. 3.4.0 16.01

Categories
RNA - Utilities for RNA