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Repository fml_gff3togtf
Name: fml_gff3togtf
Owner: vipints
Synopsis: flat file format conversion programs
A collection of tools for converting genome annotation between GTF (Gene Transfer Format), BED (Browser Extensible Data), GenBank and GFF (Generic Feature Format).

Requirements: python 2.6 or 2.7, (biopython will be installed automatically via the Galaxy Tool Shed) 

Repository-Maintainer: Vipin T. Sreedharan
Repository-Development: https://github.com/vipints/GFFtools-GX
Content homepage: https://github.com/vipints/GFFtools-GX/blob/master/README.md
Development repository: https://github.com/vipints/GFFtools-GX
Link to this repository: https://toolshed.g2.bx.psu.edu/view/vipints/fml_gff3togtf/5c6f33e20fcc
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/vipints/fml_gff3togtf
Type: unrestricted
Revision: 11:5c6f33e20fcc
This revision can be installed: True
Times cloned / installed: 3546
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_numpy_1_9 revision 83d12e13dbbd owned by iuc (prior install required)
Repository package_atlas_3_10 revision 98c017ec230d owned by iuc (prior install required)
Repository package_python_2_7 revision f761bd14343e owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_readline_6_3 revision ca1a9400d4e1 owned by iuc (prior install required)
Repository package_bzlib_1_0 revision af4887e1f595 owned by iuc (prior install required)
Repository package_xz_5_0_5 revision 944f93d45594 owned by iuc (prior install required)
Repository package_sqlite_3_8_3 revision c8a5c11cc921 owned by iuc (prior install required)
Repository package_gdbm_1_11 revision ed2537bccffc owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_libtool_2_4 revision 7f67694b167c owned by iuc (prior install required)

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
biopython 1.65 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
converter 2.1.0 any
converter 2.1.0 any
converter 2.1.0 any
converter 2.1.0 any
converter 2.1.0 any

Categories
Convert Formats - Tools for converting data formats