Repository nanopolishcomp_freqmethcalculate
Name: nanopolishcomp_freqmethcalculate
Owner: iuc
Synopsis: Wrapper for NanopolishComp: FreqMethCalculate
NanopolishComp contains 2 modules. Eventalign_collapse collapses the raw file generated by nanopolish eventalign by kmers rather than by event. Freq_meth_calculate methylation frequency at genomic CpG sites from the output of nanopolish call-methylation.
Content homepage: https://a-slide.github.io/NanopolishComp
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanopolishcomp
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/nanopolishcomp_freqmethcalculate/f08dfdcefdbd
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/nanopolishcomp_freqmethcalculate
Type: unrestricted
Revision: 1:f08dfdcefdbd
This revision can be installed: True
Times cloned / installed: 116

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
calculates methylation frequency at genomic CpG sites 0.6.11+galaxy1 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis