Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository schicexplorer_schicmergetoscool
Owner: iuc
Synopsis: Wrapper for scHiCExplorer: scHicMergeToSCool
Sequencing techniques that probe the 3D organization of the genome generate large amounts of
data whose processing, analysis and visualization is challenging. Here, we present scHiCExplorer,
a set of tools for the analysis and visualization of single-cell chromosome conformation data. scHiCExplorer
facilitates the creation of contact matrices, correction of contacts, merging,
reordering or chromosomes, dimension reduction and clustering of cells.
Repository-Maintainer: Joachim Wolff
https://github.com/joachimwolff/schicexplorer
Type: unrestricted
Revision: 1:70a13d0a950f
This revision can be installed: True
Times cloned / installed: 186

Contents of this repository

Name Description Version Minimum Galaxy Version
merge multiple cool files to one scool file 4.1 22.05

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Transcriptomics - Tools for use in the study of Transcriptomics.
Visualization - Tools for visualizing data