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Repository tetyper
Name: tetyper
Owner: iuc
Synopsis: Type a specific transposable element (TE) of interest from paired-end sequencing data.
TETyper is designed for typing a specific transposable element (TE) of interest from paired-end sequencing data. It determines single nucleotide variants (SNVs) and deletions within the TE, as well as flanking sequences surrounding the TE.
Content homepage: https://github.com/aesheppard/TETyper
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/tetyper
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/tetyper/edcf603bedfd
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/tetyper
Type: unrestricted
Revision: 2:edcf603bedfd
This revision can be installed: True
Times cloned / installed: 300

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Transposable Element Typer 1.1+galaxy1 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis