|DropletUtils provides a number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. This includes data loading, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix.
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/dropletutils_empty_drops
|Minimum Galaxy Version
|Distinguish between droplets containing cells and ambient RNA in a droplet-based single-cell RNA sequencing experiment.