Repository revision
5:393a7a35383c

Repository 'ncbi_blast_plus'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus

BLAST XML to tabular tool metadata
Miscellaneous
Convert BLAST XML output to tabular
blastxml_to_tabular
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/blastxml_to_tabular/0.0.8
0.0.8
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/blastxml_to_tabular/0.0.10
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/blastxml_to_tabular/0.0.8 (this tool)
blastxml_to_tabular
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 out_format: std
blastxml_file: blastp_four_human_vs_rhodopsin.xml
attributes: name
blastp_four_human_vs_rhodopsin.xml
name
Test-2 out_format: ext
blastxml_file: blastp_four_human_vs_rhodopsin.xml
attributes: name
blastp_four_human_vs_rhodopsin.xml
name
Test-3 out_format: std
blastxml_file: blastp_sample.xml
attributes: name
blastp_sample.xml
name
Test-4 out_format: std
blastxml_file: blastx_rhodopsin_vs_four_human.xml
attributes: name
blastx_rhodopsin_vs_four_human.xml
name
Test-5 out_format: ext
blastxml_file: blastx_rhodopsin_vs_four_human.xml
attributes: name
blastx_rhodopsin_vs_four_human.xml
name
Test-6 out_format: std
blastxml_file: blastx_sample.xml
attributes: name
blastx_sample.xml
name
Test-7 out_format: std
blastxml_file: blastp_human_vs_pdb_seg_no.xml
attributes: name
blastp_human_vs_pdb_seg_no.xml
name
Test-8 out_format: ext
blastxml_file: blastp_human_vs_pdb_seg_no.xml
attributes: name
blastp_human_vs_pdb_seg_no.xml
name