| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.2.01 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.2.00 (this tool) |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.1.08 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.1.07 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.1.06 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.1.05 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.1.04 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.1.03 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.1.01 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.1.00 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.22 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.20 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.19 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.17 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.15 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.14 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.13 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.12 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.11 |
| ncbi_blastn_wrapper |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| blast | 2.5.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
db_opts|db_opts_selector: file evalue_cutoff: 1e-40 adv_opts|adv_opts_selector: basic db_opts|subject: three_human_mRNA.fasta db_opts|database: query: rhodopsin_nucs.fasta output|out_format: 5 |
attributes: name |
rhodopsin_nucs.fasta three_human_mRNA.fasta name |
| Test-2 |
db_opts|db_opts_selector: file evalue_cutoff: 1e-40 adv_opts|adv_opts_selector: basic db_opts|subject: three_human_mRNA.fasta db_opts|database: query: rhodopsin_nucs.fasta output|out_format: 6 |
attributes: name |
rhodopsin_nucs.fasta three_human_mRNA.fasta name |
| Test-3 |
db_opts|db_opts_selector: file evalue_cutoff: 1e-40 adv_opts|adv_opts_selector: basic db_opts|subject: three_human_mRNA.fasta db_opts|database: query: rhodopsin_nucs.fasta output|std_cols: ['qseqid', 'sseqid', 'pident'] output|out_format: cols output|ext_cols: ['qlen', 'slen'] |
attributes: name |
rhodopsin_nucs.fasta three_human_mRNA.fasta name |
| Test-4 |
db_opts|db_opts_selector: db adv_opts|adv_opts_selector: advanced adv_opts|max_hits: 1 db_opts|database: three_human_mRNA query: chimera.fasta output|out_format: 6 |
attributes: name |
chimera.fasta name |
| Test-5 |
db_opts|db_opts_selector: db adv_opts|adv_opts_selector: advanced adv_opts|max_hits: 1 db_opts|database: three_human_mRNA query: chimera.fasta output|out_format: 0 |
attributes: name |
chimera.fasta name |
| Test-6 |
db_opts|db_opts_selector: db query: chimera.fasta db_opts|database: three_human_mRNA output|out_format: 6 |
attributes: name |
chimera.fasta name |
| Test-7 |
db_opts|db_opts_selector: db query: chimera.fasta db_opts|database: rhodopsin_nucs output|out_format: 6 |
attributes: name |
chimera.fasta name |
| Test-8 |
db_opts|db_opts_selector: db query: chimera.fasta db_opts|database: ['three_human_mRNA', 'rhodopsin_nucs'] output|out_format: 6 |
attributes: name |
chimera.fasta name |