| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_coverage/samtools_coverage/1.15.1+galaxy2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_coverage/samtools_coverage/1.15.1+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_coverage/samtools_coverage/1.15.1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_coverage/samtools_coverage/1.13 |
| samtools_coverage |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| samtools | 1.15.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
condition_input|input: test_1.bam |
name: value |
test_1.bam value |
| Test-2 |
condition_input|input: test_1.bam condition_histogram|n_bins: 50 condition_histogram|histogram_select: yes |
name: value |
test_1.bam value |
| Test-3 |
condition_input|input_bams: ['test_1.bam', 'test_2.bam'] condition_input|input_pooling: Yes condition_histogram|n_bins: 100 condition_histogram|histogram_select: yes |
name: value |
test_1.bam test_2.bam value |
| Test-4 |
condition_input|input: test_1.bam additional_options|region: ref1 |
name: value |
test_1.bam value |
| Test-5 |
condition_input|input_bams: ['test_1.bam', 'test_2.bam'] condition_input|input_pooling: Yes additional_options|region: ref2 |
name: value |
test_1.bam test_2.bam value |