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Repository revision

Revision: 2:8edfa0f2b1ea

Repository 'dimspy_merge_peaklists'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/computational-metabolomics/dimspy_merge_peaklists

Merge peaklists tool metadata

Miscellaneous

Name: Merge peaklists

Description: produced by the tools 'Process scans (and SIM-Stitch)' or 'Replicate filter'

Id: dimspy_merge_peaklists

Guid: toolshed.g2.bx.psu.edu/repos/computational-metabolomics/dimspy_merge_peaklists/dimspy_merge_peaklists/2.0.0+galaxy0

Version: 2.0.0+galaxy0

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/computational-metabolomics/dimspy_merge_peaklists/dimspy_merge_peaklists/2.0.0+galaxy0 (this tool)

toolshed.g2.bx.psu.edu/repos/computational-metabolomics/dimspy_merge_peaklists/dimspy_merge_peaklists/1.4.0+galaxy0

dimspy_merge_peaklists

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

dimspy

2.0.0

package

Additional information about this tool

Command:

dimspy merge-peaklists
        #for $fn in $hdf5_files_in
            --input '$fn'
        #end for

        #if $multilist
            --output .
        #else
            --output '$hdf5_file_out'
        #end if

        #if $filelist
           --filelist '$filelist'
        #end if

Interpreter: None

Forces a history refresh: False

Functional tests

name

inputs

outputs

required files

Test-1

hdf5_files_in: ['pls.h5', 'pls_QC18.h5']

name: value

pls.h5
pls_QC18.h5
value

Test-2

hdf5_files_in: ['pls.h5', 'pls_QC18.h5']
filelist: filelist_merge.txt

name: value

pls.h5
pls_QC18.h5
filelist_merge.txt
value

Test-3

hdf5_files_in: ['pls.h5', 'pls_QC18.h5']
multilist: True
filelist: filelist_multilist_merge.txt

pls.h5
pls_QC18.h5
filelist_multilist_merge.txt