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Repository dimspy_merge_peaklists
Synopsis: [Metabolomics][DIMS] DIMSpy: Merge peaklists produced by the tools 'Process scans (and SIM-Stitch)' or 'Replicate filter'
[Metabolomics][DIMS] DIMSpy: Tools for processing, filtering and analysing direct-infusion mass spectrometry-based metabolomics and lipidomics data
Type: unrestricted
Revision: 2:8edfa0f2b1ea
This revision can be installed: True
Times cloned / installed: 264

Repository README files - may contain important installation or license information

Galaxy tool wrappers for DIMSpy

Build Status (last commit) Build Status (weekly global test) galaxy-eu Git Bioconda License

Galaxy tool wrappers for Python package DIMSpy: data processing of direct-infusion mass spectrometry (DIMS)-based metabolomics and lipidomics data

Source code:

PyPI (The Python Package Index):


v2.0.0+Galaxy0 (DIMSpy v2.0.0)


Galaxy is an open, web-based platform for data intensive biomedical research. Whether on the free public server or your own instance, you can perform, reproduce, and share complete analyses.


Authors and contributors
DIMSpy acknowledges support from the following funders:
  • BBSRC, grant number BB/M019985/1
  • European Commission's H2020 programme, grant agreement number 654241
  • Wellcome Trust, grant number 202952/Z/16/Z


Please report any bugs that you find here. Or fork the repository on GitHub and create a pull request (PR). We welcome all contributions, and we will help you to make the PR if you are new to git.


  • First release (Python 3-based version DIMSpy)
  • System Message: WARNING/2 (<string>, line 2); backlink

    Duplicate explicit target name: "dimspy".

    Final release (Python 2-based version DIMSpy)


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DIMSpy and Galaxy tools are released under the GNU General Public License v3.0 (see LICENSE file)

Third-party licenses and copyright

RawFileReader reading tool. Copyright © 2016 by Thermo Fisher Scientific, Inc. All rights reserved. See RawFileReaderLicense for licensing information. Using DIMSpy software for processing Thermo Fisher Scientific *.raw files implies the acceptance of the RawFileReader license terms. Anyone receiving RawFileReader as part of a larger software distribution (in the current context, as part of DIMSpy) is considered an "end user" under section 3.3 of the RawFileReader License, and is not granted rights to redistribute RawFileReader.

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Contents of this repository

Name Description Version Minimum Galaxy Version
produced by the tools 'Process scans (and SIM-Stitch)' or 'Replicate filter' 2.0.0+galaxy0 16.01

Metabolomics - Tools for use in the study of Metabolomics