| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_build_gb/4.3+T.galaxy6 |
| toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_build_gb/4.3+T.galaxy5 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_build_gb/4.3+T.galaxy4 |
| toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_build_gb/4.3+T.galaxy3 |
| toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_build_gb/4.3+T.galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_build_gb/4.3+T.galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_build_gb/4.3.1t.1 |
| snpEff_build_gb |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| snpeff | 4.3.1t | package |
| biopython | 1.79 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
genome_version: pBR322 input_type|input: pBR322.gbk input_type|input_type_selector: gb |
name: value name: value |
pBR322.gbk value |
| Test-2 |
genome_version: pBR322 input_type|input: pBR322.gbk.gz input_type|input_type_selector: gb |
name: value name: value |
pBR322.gbk.gz value |
| Test-3 |
genome_version: pBR322 input_type|input: pBR322.gff3 input_type|reference_source|input_fasta: pBR322_test2.fna input_type|reference_source|reference_source_selector: history input_type|input_type_selector: gff |
name: value |
pBR322.gff3 pBR322_test2.fna value |
| Test-4 |
genome_version: pBR322 input_type|input: pBR322.gff3 input_type|reference_source|input_fasta: pBR322_test2.fna.gz input_type|reference_source|reference_source_selector: history input_type|input_type_selector: gff |
name: value |
pBR322.gff3 pBR322_test2.fna.gz value |
| Test-5 |
genome_version: Saccharomyces_mito input_type|input: Saccharomyces_mito.gtf input_type|reference_source|input_fasta: Saccharomyces_mito.fa.gz input_type|reference_source|reference_source_selector: history input_type|input_type_selector: gtf |
name: value |
Saccharomyces_mito.gtf Saccharomyces_mito.fa.gz value |