Repository revision
26:5b80f544c67f

Repository 'snpeff'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/snpeff

SnpEff chromosome-info: tool metadata
Miscellaneous
list chromosome names/lengths
snpEff_get_chr_names
toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_get_chr_names/4.3+T.galaxy2
4.3+T.galaxy2
snpEff -version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_get_chr_names/4.3+T.galaxy2 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_get_chr_names/4.3+T.galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_get_chr_names/@wrapper_version@.galaxy1
snpEff_get_chr_names
Requirements (dependencies defined in the <requirements> tag set)
name version type
snpeff 4.3.1t package
gawk 5.0.1 package
Functional tests
name inputs outputs required files
Test-1 snpDb|genome_version: Bacillus_subtilis_subsp_subtilis_str_168
snpDb|genomeSrc: named
name: value
value
Test-2 snpDb|genome_version: should_not_match
snpDb|genomeSrc: named