Repository revision
6:1a642de6db01

Repository 'gtf2gene_list'
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/gtf2gene_list

GTF2GeneList tool metadata
Miscellaneous
GTF2GeneList
extracts a complete annotation table or subsets thereof from an Ensembl GTF using rtracklayer
_ensembl_gtf2gene_list
toolshed.g2.bx.psu.edu/repos/ebi-gxa/gtf2gene_list/_ensembl_gtf2gene_list/1.42.1+galaxy6
1.42.1+galaxy6
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/gtf2gene_list/_ensembl_gtf2gene_list/1.52.0+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/gtf2gene_list/_ensembl_gtf2gene_list/1.42.1+galaxy6 (this tool)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/gtf2gene_list/_ensembl_gtf2gene_list/1.42.1+galaxy5
toolshed.g2.bx.psu.edu/repos/ebi-gxa/gtf2gene_list/_ensembl_gtf2gene_list/1.42.1+galaxy4
toolshed.g2.bx.psu.edu/repos/ebi-gxa/gtf2gene_list/_ensembl_gtf2gene_list/1.42.1+galaxy3
toolshed.g2.bx.psu.edu/repos/ebi-gxa/gtf2gene_list/_ensembl_gtf2gene_list/1.42.1+galaxy2
toolshed.g2.bx.psu.edu/repos/ebi-gxa/gtf2gene_list/_ensembl_gtf2gene_list/1.42.1+galaxy1
toolshed.g2.bx.psu.edu/repos/ebi-gxa/gtf2gene_list/_ensembl_gtf2gene_list/1.42.1+galaxy0
_ensembl_gtf2gene_list
Requirements (dependencies defined in the <requirements> tag set)
name version type
bioconductor-rtracklayer 1.42.1 package
bioconductor-biostrings 2.50.2 package
r-optparse 1.6.4 package
Functional tests
name inputs outputs required files
Test-1 gtf_input: test.gtf
 attributes: name
 test.gtf
name