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Repository gtf2gene_list
Owner: ebi-gxa
Synopsis: Utility to extract annotations from Ensembl GTF files.
Given a GTF file from Ensembl, this utility will generate a simple text file containing annotation, derived using the rtracklayer R package. All annotations can be extracted or a selection of specified columns, with or without a header.
Type: unrestricted
Revision: 7:14b3f2a4523b
This revision can be installed: True
Times cloned / installed: 703

Contents of this repository

Name Description Version Minimum Galaxy Version
extracts a complete annotation table or subsets thereof from an Ensembl GTF using rtracklayer 1.52.0+galaxy0 18.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis