changeset 3:f3243301d74f draft default tip

Uploaded
author anton
date Mon, 15 Sep 2014 14:53:14 -0400
parents 47dd84123b42
children
files tool_dependencies.xml vcfprimers.xml
diffstat 2 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Wed Jun 25 16:50:33 2014 -0400
+++ b/tool_dependencies.xml	Mon Sep 15 14:53:14 2014 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-  <package name="vcflib" version="86723982aa">
-      <repository changeset_revision="a6826babf644" name="vcflib_86723982aa" owner="anton" toolshed="https://toolshed.g2.bx.psu.edu" />
+    <package name="vcflib" version="8a5602bf07">
+        <repository changeset_revision="bffe0495cd92" name="package_vcflib_8a5602bf07" owner="anton" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>
--- a/vcfprimers.xml	Wed Jun 25 16:50:33 2014 -0400
+++ b/vcfprimers.xml	Mon Sep 15 14:53:14 2014 -0400
@@ -1,6 +1,6 @@
 <tool id="vcfprimers" name="VCFprimers:" version="0.0.2">
 <requirements>
-    <requirement type="package" version="86723982aa">vcflib</requirement>
+    <requirement type="package" version="8a5602bf07">vcflib</requirement>
     <!-- <requirement type="package" version="0.1.18">samtools</requirement> -->
 </requirements>
   <description>Extract flanking sequences for each VCF record</description>
@@ -49,7 +49,7 @@
     </tests>
   <help>
 
-For each VCF record, extract the flanking sequences, and write them to stdout as FASTA
+For each VCF record, extract the flanking sequences, and write them as FASTA
 records suitable for alignment.  This tool is intended for use in designing validation
 experiments.  Primers extracted which would flank all of the alleles at multi-allelic
 sites.  The name of the FASTA "reads" indicates the VCF record which they apply to.