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annotate process_radtags_rename.sh @ 1:228d0cbc14f9 draft default tip

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planemo upload for repository https://github.com/kaktus42/galaxytools/tree/master/tools/stacks commit b7d7874d721ed5ac647eecf630b46deaae1a68f2-dirty
author avowinkel
date Mon, 29 Jun 2015 17:22:59 -0400
parents af879fc0d734
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 #!/bin/bash
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3 EXT=$1
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228d0cbc14f9 planemo upload for repository https://github.com/kaktus42/galaxytools/tree/master/tools/stacks commit b7d7874d721ed5ac647eecf630b46deaae1a68f2-dirty
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5 mv output/*.discards output/discards.discards
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6 mkdir splits
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7 mv output/sample_* splits
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8 #ls -lah output splits
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9 for i in splits/*.fq; do mv "$i" "${i/.fq}".${EXT}; done