Mercurial > repos > bgruening > infernal

comparison test-data/cmcalibrate_input.cm @ 5:6e18e0b098cd draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
author bgruening
date Sat, 21 Jan 2017 17:36:57 -0500
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4:c47a7c52ac4f 5:6e18e0b098cd
1 INFERNAL1/a [1.1.2 | July 2016]
2 NAME dataset_838
3 STATES 233
4 NODES 62
5 CLEN 73
6 W 90
7 ALPH RNA
8 RF no
9 CONS yes
10 MAP yes
11 DATE Thu Dec 15 13:43:26 2016
12 COM [1] cmbuild -F --fast --symfrac 0.5 --wpb --p7ere 0.38 --EmN 200 --EvN 200 --ElfN 200 --EgfN 200 --eent /home/wanli/galaxy/database/files/000/dataset_839.dat /home/wanli/galaxy/database/files/000/dataset_838.dat
13 COM [2] cmcalibrate Downloads/download.cm
14 PBEGIN 0.05
15 PEND 0.05
16 WBETA 1e-07
17 QDBBETA1 1e-07
18 QDBBETA2 1e-15
19 N2OMEGA 1.52588e-05
20 N3OMEGA 1.52588e-05
21 ELSELF -0.08926734
22 NSEQ 2
23 EFFN 1.902344
24 CKSUM 1256650105
25 NULL 0.000 0.000 0.000 0.000
26 EFP7GF -2.8151 0.73715
27 ECMLC 0.80543 -3.96449 2.80237 1600000 279383 0.004295
28 ECMGC 0.42297 -15.07779 -2.84171 1600000 70757 0.005653
29 ECMLI 0.67085 -3.93573 3.92167 1600000 233559 0.005138
30 ECMGI 0.43319 -10.87224 0.43591 1600000 53640 0.007457
31 CM
32 [ ROOT 0 ] - - - - - -
33 S 0 -1 0 1 4 0 1 90 110 -6.854 -8.100 -0.081 -4.553
34 IL 1 1 2 1 4 3 27 91 111 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000
35 IR 2 2 3 2 3 4 29 92 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000
36 [ MATR 1 ] - 74 - a - -
37 MR 3 2 3 5 5 5 30 90 110 -7.084 -0.039 -6.900 -7.112 -8.004 0.711 -1.386 0.490 -0.798
38 D 4 2 3 5 5 1 23 88 109 -5.352 -0.707 -2.978 -4.409 -2.404
39 IR 5 5 3 5 5 3 27 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
40 [ MATP 2 ] 1 73 g c - -
41 MP 6 5 3 10 6 6 31 89 109 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.271 -2.721 -3.286 0.880 -2.952 -4.020 1.406 -3.346 -3.336 2.423 -3.790 -0.527 1.874 -3.393 -0.601 -2.220
42 ML 7 5 3 10 6 3 25 87 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
43 MR 8 5 3 10 6 3 25 87 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
44 D 9 5 3 10 6 0 20 85 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
45 IL 10 10 5 10 6 3 26 88 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
46 IR 11 11 6 11 5 3 27 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
47 [ MATP 3 ] 2 72 C G - -
48 MP 12 11 6 16 6 5 30 87 107 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -4.534 -4.439 -4.227 -0.672 -2.948 -4.641 3.546 -3.756 -4.276 -0.430 -4.538 -2.386 0.568 -4.605 -0.654 -3.116
49 ML 13 11 6 16 6 3 24 85 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
50 MR 14 11 6 16 6 2 24 85 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
51 D 15 11 6 16 6 0 20 83 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
52 IL 16 16 5 16 6 3 26 86 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
53 IR 17 17 6 17 5 3 26 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
54 [ MATP 4 ] 3 71 g c - -
55 MP 18 17 6 22 6 5 29 85 105 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.399 -2.852 -3.384 0.778 -2.912 -4.071 2.215 -3.369 -3.430 2.395 -3.863 -0.655 0.991 -3.497 -0.541 -2.295
56 ML 19 17 6 22 6 2 24 83 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
57 MR 20 17 6 22 6 2 24 83 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
58 D 21 17 6 22 6 0 19 81 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
59 IL 22 22 5 22 6 3 25 84 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
60 IR 23 23 6 23 5 3 26 84 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
61 [ MATP 5 ] 4 70 g c - -
62 MP 24 23 6 28 6 5 27 83 103 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.685 -2.520 -3.739 0.996 -4.349 -4.510 0.110 -4.031 -3.653 2.956 -4.094 1.654 -0.173 -3.846 -1.845 -2.615
63 ML 25 23 6 28 6 2 23 81 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
64 MR 26 23 6 28 6 2 23 81 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
65 D 27 23 6 28 6 0 19 79 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
66 IL 28 28 5 28 6 3 25 82 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
67 IR 29 29 6 29 5 3 25 82 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
68 [ MATP 6 ] 5 69 A U - -
69 MP 30 29 6 34 6 5 25 81 101 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.778 -2.813 -3.798 3.323 -4.129 -5.190 0.170 -3.841 -3.690 1.093 -4.237 -0.291 -0.248 -4.380 -1.771 -2.632
70 ML 31 29 6 34 6 2 22 79 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
71 MR 32 29 6 34 6 2 22 79 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
72 D 33 29 6 34 6 0 19 77 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
73 IL 34 34 5 34 6 3 23 80 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
74 IR 35 35 6 35 5 3 23 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
75 [ MATP 7 ] 6 68 U A - -
76 MP 36 35 6 40 6 5 23 79 99 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -4.174 -3.998 -4.014 -0.294 -2.959 -4.580 1.369 -3.654 -4.019 -0.038 -4.393 -1.898 3.320 -4.326 -0.636 -2.845
77 ML 37 35 6 40 6 2 21 78 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
78 MR 38 35 6 40 6 2 21 78 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
79 D 39 35 6 40 6 0 18 76 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
80 IL 40 40 5 40 6 2 22 78 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
81 IR 41 41 6 41 5 2 22 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
82 [ MATP 8 ] 7 67 u a - -
83 MP 42 41 6 46 4 3 21 77 97 -6.937 -7.144 -0.054 -5.558 -3.032 -2.716 -3.091 1.906 -2.672 -3.917 1.568 -3.103 -3.103 1.300 -3.601 -0.598 2.047 -3.280 -0.404 -2.050
84 ML 43 41 6 46 4 2 20 77 97 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094
85 MR 44 41 6 46 4 1 19 76 97 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094
86 D 45 41 6 46 4 0 18 75 96 -4.568 -4.250 -2.265 -0.520
87 IL 46 46 5 46 4 2 21 78 99 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000
88 IR 47 47 6 47 3 2 21 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
89 [ MATL 9 ] 8 - U - - -
90 ML 48 47 6 50 3 2 19 74 94 -7.954 -0.021 -6.608 -1.467 -1.466 -2.199 1.613
91 D 49 47 6 50 3 0 18 73 93 -6.174 -1.687 -0.566
92 IL 50 50 3 50 3 2 20 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
93 [ MATL 10 ] 9 - A - - -
94 ML 51 50 3 53 2 1 18 73 93 -8.344 -0.004 1.714 -2.351 -1.985 -1.891
95 D 52 50 3 53 2 0 17 72 92 -8.445 -0.004
96 IL 53 53 3 53 2 1 19 74 94 -1.823 -0.479 0.000 0.000 0.000 0.000
97 [ BIF 11 ] - - - - - -
98 B 54 53 3 124 55 0 17 72 92
99 [ BEGR 43 ] - - - - - -
100 S 55 54 1 56 3 0 0 36 55 -7.954 -0.021 -6.608
101 IL 56 56 2 56 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
102 [ MATL 44 ] 45 - A - - -
103 ML 57 56 2 59 3 1 1 36 55 -7.954 -0.021 -6.608 1.714 -2.351 -1.985 -1.891
104 D 58 56 2 59 3 0 0 35 54 -6.174 -1.687 -0.566
105 IL 59 59 3 59 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
106 [ MATL 45 ] 46 - G - - -
107 ML 60 59 3 62 3 1 1 35 54 -7.954 -0.021 -6.608 -1.559 -2.775 1.719 -2.162
108 D 61 59 3 62 3 0 0 34 53 -6.174 -1.687 -0.566
109 IL 62 62 3 62 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
110 [ MATL 46 ] 47 - a - - -
111 ML 63 62 3 65 3 1 1 34 53 -7.954 -0.445 -1.937 0.698 -1.388 0.507 -0.799
112 D 64 62 3 65 3 0 0 33 52 -6.174 -1.687 -0.566
113 IL 65 65 3 65 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
114 [ MATL 47 ] 48 - U - - -
115 ML 66 65 3 68 3 1 1 33 52 -7.537 -0.028 -6.191 -0.748 -0.887 -1.429 1.318
116 D 67 65 3 68 3 0 0 32 51 -7.898 -0.338 -2.290
117 IL 68 68 3 68 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
118 [ MATL 48 ] 49 - C - - -
119 ML 69 68 3 71 5 1 1 32 51 -7.084 -0.039 -6.900 -7.112 -8.004 -1.716 1.617 -2.539 -1.135
120 D 70 68 3 71 5 0 0 31 50 -4.959 -0.803 -4.221 -2.596 -2.508
121 IL 71 71 3 71 5 1 1 32 51 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000
122 [ MATP 49 ] 50 66 C G - -
123 MP 72 71 3 76 6 2 2 31 50 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -4.534 -4.439 -4.227 -0.672 -2.948 -4.641 3.546 -3.756 -4.276 -0.430 -4.538 -2.386 0.568 -4.605 -0.654 -3.116
124 ML 73 71 3 76 6 1 1 30 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
125 MR 74 71 3 76 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
126 D 75 71 3 76 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
127 IL 76 76 5 76 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
128 IR 77 77 6 77 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
129 [ MATP 50 ] 51 65 g c - -
130 MP 78 77 6 82 6 2 2 29 48 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.267 -2.724 -3.283 0.878 -2.942 -4.019 1.414 -3.339 -3.332 2.409 -3.787 -0.532 1.888 -3.392 -0.592 -2.217
131 ML 79 77 6 82 6 1 1 28 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
132 MR 80 77 6 82 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
133 D 81 77 6 82 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
134 IL 82 82 5 82 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
135 IR 83 83 6 83 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
136 [ MATP 51 ] 52 64 G C - -
137 MP 84 83 6 88 6 2 2 27 46 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -4.726 -3.086 -4.823 0.211 -5.210 -4.688 -0.578 -5.065 -4.317 3.634 -4.655 -0.784 -0.964 -4.457 -2.615 -3.700
138 ML 85 83 6 88 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
139 MR 86 83 6 88 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
140 D 87 83 6 88 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
141 IL 88 88 5 88 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
142 IR 89 89 6 89 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
143 [ MATP 52 ] 53 63 g c - -
144 MP 90 89 6 94 6 2 2 25 44 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.267 -2.724 -3.283 0.878 -2.942 -4.019 1.414 -3.339 -3.332 2.409 -3.787 -0.532 1.888 -3.392 -0.592 -2.217
145 ML 91 89 6 94 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
146 MR 92 89 6 94 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
147 D 93 89 6 94 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
148 IL 94 94 5 94 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
149 IR 95 95 6 95 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
150 [ MATP 53 ] 54 62 G C - -
151 MP 96 95 6 100 4 2 2 23 42 -6.937 -7.144 -0.054 -5.558 -4.726 -3.086 -4.823 0.211 -5.210 -4.688 -0.578 -5.065 -4.317 3.634 -4.655 -0.784 -0.964 -4.457 -2.615 -3.700
152 ML 97 95 6 100 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094
153 MR 98 95 6 100 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094
154 D 99 95 6 100 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520
155 IL 100 100 5 100 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000
156 IR 101 101 6 101 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
157 [ MATL 54 ] 55 - U - - -
158 ML 102 101 6 104 3 1 1 20 39 -7.954 -0.021 -6.608 -1.467 -1.466 -2.199 1.613
159 D 103 101 6 104 3 0 0 19 38 -6.174 -1.687 -0.566
160 IL 104 104 3 104 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
161 [ MATL 55 ] 56 - U - - -
162 ML 105 104 3 107 3 1 1 19 37 -7.954 -0.021 -6.608 -1.467 -1.466 -2.199 1.613
163 D 106 104 3 107 3 0 0 18 37 -6.174 -1.687 -0.566
164 IL 107 107 3 107 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
165 [ MATL 56 ] 57 - C - - -
166 ML 108 107 3 110 3 1 1 18 36 -7.954 -0.021 -6.608 -1.716 1.617 -2.539 -1.135
167 D 109 107 3 110 3 0 0 17 36 -6.174 -1.687 -0.566
168 IL 110 110 3 110 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
169 [ MATL 57 ] 58 - G - - -
170 ML 111 110 3 113 3 1 1 16 35 -7.954 -0.021 -6.608 -1.559 -2.775 1.719 -2.162
171 D 112 110 3 113 3 0 0 16 34 -6.174 -1.687 -0.566
172 IL 113 113 3 113 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
173 [ MATL 58 ] 59 - A - - -
174 ML 114 113 3 116 3 1 1 15 33 -7.954 -0.021 -6.608 1.714 -2.351 -1.985 -1.891
175 D 115 113 3 116 3 0 0 15 33 -6.174 -1.687 -0.566
176 IL 116 116 3 116 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
177 [ MATL 59 ] 60 - u - - -
178 ML 117 116 3 119 3 1 1 13 31 -7.954 -0.021 -6.608 -0.697 0.451 -1.474 0.728
179 D 118 116 3 119 3 0 0 13 32 -6.174 -1.687 -0.566
180 IL 119 119 3 119 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
181 [ MATL 60 ] 61 - u - - -
182 ML 120 119 3 122 2 1 1 1 1 * 0.000 -0.698 0.466 -1.475 0.716
183 D 121 119 3 122 2 0 0 0 0 * 0.000
184 IL 122 122 3 122 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000
185 [ END 61 ] - - - - - -
186 E 123 122 3 -1 0 0 0 0 0
187 [ BEGL 12 ] - - - - - -
188 S 124 54 1 125 1 0 4 50 69 0.000
189 [ BIF 13 ] - - - - - -
190 B 125 124 1 126 176 0 4 50 69
191 [ BEGL 14 ] - - - - - -
192 S 126 125 1 127 4 0 0 31 49 -0.045 -6.828 -6.235 -6.875
193 [ MATP 15 ] 10 26 G C - -
194 MP 127 126 1 131 6 2 2 31 50 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -4.726 -3.086 -4.823 0.211 -5.210 -4.688 -0.578 -5.065 -4.317 3.634 -4.655 -0.784 -0.964 -4.457 -2.615 -3.700
195 ML 128 126 1 131 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
196 MR 129 126 1 131 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
197 D 130 126 1 131 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
198 IL 131 131 5 131 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
199 IR 132 132 6 132 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
200 [ MATP 16 ] 11 25 c g - -
201 MP 133 132 6 137 6 2 2 29 47 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.645 -3.572 -3.530 0.166 -2.488 -4.110 2.664 -3.192 -3.541 0.423 -3.935 -1.548 2.309 -3.788 -0.162 -2.413
202 ML 134 132 6 137 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
203 MR 135 132 6 137 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
204 D 136 132 6 137 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
205 IL 137 137 5 137 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
206 IR 138 138 6 138 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
207 [ MATP 17 ] 12 24 g c - -
208 MP 139 138 6 143 6 2 2 27 45 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.267 -2.724 -3.283 0.878 -2.942 -4.019 1.414 -3.339 -3.332 2.409 -3.787 -0.532 1.888 -3.392 -0.592 -2.217
209 ML 140 138 6 143 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
210 MR 141 138 6 143 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
211 D 142 138 6 143 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
212 IL 143 143 5 143 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
213 IR 144 144 6 144 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
214 [ MATP 18 ] 13 23 c g - -
215 MP 145 144 6 149 4 2 2 25 43 -6.937 -7.144 -0.054 -5.558 -3.062 -2.991 -3.078 0.453 -2.412 -3.763 2.525 -2.992 -3.107 0.713 -3.560 -1.119 1.151 -3.287 -0.202 1.395
216 ML 146 144 6 149 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094
217 MR 147 144 6 149 4 1 1 25 44 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094
218 D 148 144 6 149 4 0 0 24 43 -4.568 -4.250 -2.265 -0.520
219 IL 149 149 5 149 4 1 1 27 46 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000
220 IR 150 150 6 150 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
221 [ MATL 19 ] 14 - A - - -
222 ML 151 150 6 153 3 1 1 22 40 -7.954 -0.021 -6.608 1.714 -2.351 -1.985 -1.891
223 D 152 150 6 153 3 0 0 21 40 -6.174 -1.687 -0.566
224 IL 153 153 3 153 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
225 [ MATL 20 ] 15 - a - - -
226 ML 154 153 3 156 3 1 1 20 39 -7.954 -0.021 -6.608 0.698 -1.388 0.507 -0.799
227 D 155 153 3 156 3 0 0 20 38 -6.174 -1.687 -0.566
228 IL 156 156 3 156 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
229 [ MATL 21 ] 16 - u - - -
230 ML 157 156 3 159 3 1 1 19 38 -7.954 -0.445 -1.937 -0.697 0.451 -1.474 0.728
231 D 158 156 3 159 3 0 0 19 37 -6.174 -1.687 -0.566
232 IL 159 159 3 159 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
233 [ MATL 22 ] 17 - U - - -
234 ML 160 159 3 162 3 1 1 18 37 -7.537 -0.028 -6.191 -0.748 -0.887 -1.429 1.318
235 D 161 159 3 162 3 0 0 17 36 -7.898 -0.338 -2.290
236 IL 162 162 3 162 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
237 [ MATL 23 ] 18 - G - - -
238 ML 163 162 3 165 3 1 1 17 35 -7.954 -0.021 -6.608 -1.559 -2.775 1.719 -2.162
239 D 164 162 3 165 3 0 0 16 35 -6.174 -1.687 -0.566
240 IL 165 165 3 165 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
241 [ MATL 24 ] 19 - G - - -
242 ML 166 165 3 168 3 1 1 15 33 -7.954 -0.021 -6.608 -1.559 -2.775 1.719 -2.162
243 D 167 165 3 168 3 0 0 15 33 -6.174 -1.687 -0.566
244 IL 168 168 3 168 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
245 [ MATL 25 ] 20 - g - - -
246 ML 169 168 3 171 3 1 1 13 25 -1.972 -0.445 -6.608 -0.334 0.192 0.338 -0.322
247 D 170 168 3 171 3 0 0 10 22 -6.174 -1.687 -0.566
248 IL 171 171 3 171 3 1 1 13 25 -2.100 -0.452 -4.800 0.000 0.000 0.000 0.000
249 [ MATL 26 ] 22 - A - - -
250 ML 172 171 3 174 2 1 1 1 1 * 0.000 1.714 -2.351 -1.985 -1.891
251 D 173 171 3 174 2 0 0 0 0 * 0.000
252 IL 174 174 3 174 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000
253 [ END 27 ] - - - - - -
254 E 175 174 3 -1 0 0 0 0 0
255 [ BEGR 28 ] - - - - - -
256 S 176 125 1 177 3 0 0 32 51 -7.954 -0.021 -6.608
257 IL 177 177 2 177 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
258 [ MATL 29 ] 27 - a - - -
259 ML 178 177 2 180 5 1 1 32 51 -7.084 -0.039 -6.900 -7.112 -8.004 0.698 -1.388 0.507 -0.799
260 D 179 177 2 180 5 0 0 31 50 -4.959 -0.803 -4.221 -2.596 -2.508
261 IL 180 180 3 180 5 1 1 32 51 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000
262 [ MATP 30 ] 28 44 c g - -
263 MP 181 180 3 185 6 2 2 31 50 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.715 -3.704 -3.557 -0.032 -2.461 -4.079 2.720 -3.195 -3.586 0.182 -3.949 -1.773 1.122 -3.840 1.943 -2.473
264 ML 182 180 3 185 6 1 1 30 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
265 MR 183 180 3 185 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
266 D 184 180 3 185 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
267 IL 185 185 5 185 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
268 IR 186 186 6 186 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
269 [ MATP 31 ] 29 43 C G - -
270 MP 187 186 6 191 6 2 2 29 48 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -4.534 -4.439 -4.227 -0.672 -2.948 -4.641 3.546 -3.756 -4.276 -0.430 -4.538 -2.386 0.568 -4.605 -0.654 -3.116
271 ML 188 186 6 191 6 1 1 28 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
272 MR 189 186 6 191 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
273 D 190 186 6 191 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
274 IL 191 191 5 191 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
275 IR 192 192 6 192 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
276 [ MATP 32 ] 30 42 A U - -
277 MP 193 192 6 197 6 2 2 27 46 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.778 -2.813 -3.798 3.323 -4.129 -5.190 0.170 -3.841 -3.690 1.093 -4.237 -0.291 -0.248 -4.380 -1.771 -2.632
278 ML 194 192 6 197 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
279 MR 195 192 6 197 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
280 D 196 192 6 197 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
281 IL 197 197 5 197 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
282 IR 198 198 6 198 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
283 [ MATP 33 ] 31 41 g c - -
284 MP 199 198 6 203 6 2 2 25 44 -9.103 -9.042 -0.021 -7.819 -8.099 -8.494 -3.399 -2.852 -3.384 0.778 -2.912 -4.071 2.215 -3.369 -3.430 2.395 -3.863 -0.655 0.991 -3.497 -0.541 -2.295
285 ML 200 198 6 203 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094
286 MR 201 198 6 203 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094
287 D 202 198 6 203 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319
288 IL 203 203 5 203 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000
289 IR 204 204 6 204 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000
290 [ MATP 34 ] 32 40 g c - -
291 MP 205 204 6 209 4 2 2 23 42 -6.937 -7.144 -0.054 -5.558 -3.526 -2.500 -3.557 2.082 -3.985 -4.395 0.429 -3.836 -3.552 2.834 -4.007 -0.120 0.119 -3.682 -1.529 -2.458
292 ML 206 204 6 209 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094
293 MR 207 204 6 209 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094
294 D 208 204 6 209 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520
295 IL 209 209 5 209 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000
296 IR 210 210 6 210 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
297 [ MATL 35 ] 33 - C - - -
298 ML 211 210 6 213 3 1 1 20 39 -7.954 -0.021 -6.608 -1.716 1.617 -2.539 -1.135
299 D 212 210 6 213 3 0 0 19 38 -6.174 -1.687 -0.566
300 IL 213 213 3 213 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
301 [ MATL 36 ] 34 - U - - -
302 ML 214 213 3 216 3 1 1 19 37 -7.954 -0.021 -6.608 -1.467 -1.466 -2.199 1.613
303 D 215 213 3 216 3 0 0 18 37 -6.174 -1.687 -0.566
304 IL 216 216 3 216 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
305 [ MATL 37 ] 35 - u - - -
306 ML 217 216 3 219 3 1 1 18 36 -7.954 -0.021 -6.608 -0.363 -0.937 0.342 0.519
307 D 218 216 3 219 3 0 0 17 36 -6.174 -1.687 -0.566
308 IL 219 219 3 219 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
309 [ MATL 38 ] 36 - u - - -
310 ML 220 219 3 222 3 1 1 16 35 -7.954 -0.021 -6.608 0.558 -0.842 -1.047 0.571
311 D 221 219 3 222 3 0 0 16 34 -6.174 -1.687 -0.566
312 IL 222 222 3 222 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
313 [ MATL 39 ] 37 - a - - -
314 ML 223 222 3 225 3 1 1 15 33 -7.954 -0.021 -6.608 0.628 0.246 -1.103 -0.315
315 D 224 222 3 225 3 0 0 15 33 -6.174 -1.687 -0.566
316 IL 225 225 3 225 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
317 [ MATL 40 ] 38 - a - - -
318 ML 226 225 3 228 3 1 1 13 31 -7.954 -0.021 -6.608 0.698 -1.388 0.507 -0.799
319 D 227 225 3 228 3 0 0 13 32 -6.174 -1.687 -0.566
320 IL 228 228 3 228 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000
321 [ MATL 41 ] 39 - a - - -
322 ML 229 228 3 231 2 1 1 1 1 * 0.000 0.628 0.246 -1.103 -0.315
323 D 230 228 3 231 2 0 0 0 0 * 0.000
324 IL 231 231 3 231 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000
325 [ END 42 ] - - - - - -
326 E 232 231 3 -1 0 0 0 0 0
327 //
328 HMMER3/f [3.1b3 | July 2016]
329 NAME dataset_838
330 LENG 73
331 MAXL 164
332 ALPH RNA
333 RF no
334 MM no
335 CONS yes
336 CS yes
337 MAP yes
338 DATE Thu Dec 15 13:43:26 2016
339 COM [1] cmbuild -F --fast --symfrac 0.5 --wpb --p7ere 0.38 --EmN 200 --EvN 200 --ElfN 200 --EgfN 200 --eent /home/wanli/galaxy/database/files/000/dataset_839.dat /home/wanli/galaxy/database/files/000/dataset_838.dat
340 NSEQ 2
341 EFFN 1.628906
342 CKSUM 1256650105
343 STATS LOCAL MSV -8.5184 0.73715
344 STATS LOCAL VITERBI -10.4826 0.73715
345 STATS LOCAL FORWARD -2.6863 0.73715
346 HMM A C G U
347 m->m m->i m->d i->m i->i d->m d->d
348 COMPO 1.47076 1.39566 1.26733 1.42298
349 1.38629 1.38629 1.38629 1.38629
350 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
351 1 1.93554 1.65715 0.96626 1.25713 1 g - - (
352 1.38629 1.38629 1.38629 1.38629
353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
354 2 2.82012 0.35286 2.54849 1.83556 2 C - - (
355 1.38629 1.38629 1.38629 1.38629
356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
357 3 2.00424 1.20191 0.98969 1.64544 3 g - - (
358 1.38629 1.38629 1.38629 1.38629
359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
360 4 1.87354 2.44340 0.41370 2.31917 4 G - - (
361 1.38629 1.38629 1.38629 1.38629
362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
363 5 0.53128 2.34938 1.53172 2.29704 5 A - - (
364 1.38629 1.38629 1.38629 1.38629
365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
366 6 2.58639 1.62982 2.28826 0.46633 6 U - - (
367 1.38629 1.38629 1.38629 1.38629
368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
369 7 1.38468 1.54821 1.52008 1.14484 7 u - - (
370 1.38629 1.38629 1.38629 1.38629
371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
372 8 2.26593 2.29030 2.76601 0.31181 8 U - - ,
373 1.38629 1.38629 1.38629 1.38629
374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
375 9 0.23431 2.86460 2.62614 2.53179 9 A - - ,
376 1.38629 1.38629 1.38629 1.38629
377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
378 10 2.35339 2.85006 0.24040 2.80018 10 G - - <
379 1.38629 1.38629 1.38629 1.38629
380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
381 11 2.36315 0.89679 2.07651 0.98716 11 c - - <
382 1.38629 1.38629 1.38629 1.38629
383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
384 12 1.94223 1.65192 0.97261 1.24884 12 g - - <
385 1.38629 1.38629 1.38629 1.38629
386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
387 13 2.11261 1.00158 1.82880 1.04648 13 c - - <
388 1.38629 1.38629 1.38629 1.38629
389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
390 14 0.23431 2.86460 2.62614 2.53179 14 A - - _
391 1.38629 1.38629 1.38629 1.38629
392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
393 15 0.91793 2.28477 1.06301 1.87441 15 a - - _
394 1.38629 1.38629 1.38629 1.38629
395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
396 16 1.81039 1.10283 2.34106 0.89586 16 u - - _
397 1.38629 1.38629 1.38629 1.38629
398 0.33427 3.73767 1.34581 1.46634 0.26236 1.09861 0.40547
399 17 1.82572 1.94090 2.28977 0.52082 17 U - - _
400 1.38629 1.38629 1.38629 1.38629
401 0.06440 3.46780 3.46780 1.46634 0.26236 0.16798 1.86670
402 18 2.30534 3.12204 0.23733 2.69597 18 G - - _
403 1.38629 1.38629 1.38629 1.38629
404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
405 19 2.30534 3.12204 0.23733 2.69597 19 G - - _
406 1.38629 1.38629 1.38629 1.38629
407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
408 20 1.57379 1.27789 1.18703 1.56547 20 g - - _
409 1.38629 1.38629 1.38629 1.38629
410 0.33427 1.34581 3.73767 0.17384 1.83528 1.09861 0.40547
411 21 0.23431 2.86460 2.62614 2.53179 22 A - - _
412 1.38629 1.38629 1.38629 1.38629
413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
414 22 1.73793 1.99628 0.88761 1.28505 23 g - - >
415 1.38629 1.38629 1.38629 1.38629
416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
417 23 1.40058 1.07188 1.48214 1.69265 24 c - - >
418 1.38629 1.38629 1.38629 1.38629
419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
420 24 1.13668 2.23736 0.79225 2.12401 25 g - - >
421 1.38629 1.38629 1.38629 1.38629
422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
423 25 2.99476 0.28499 2.66857 2.05123 26 C - - >
424 1.38629 1.38629 1.38629 1.38629
425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
426 26 0.91793 2.28477 1.06301 1.87441 27 a - - ,
427 1.38629 1.38629 1.38629 1.38629
428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
429 27 2.44995 0.86440 2.19692 0.96430 28 c - - <
430 1.38629 1.38629 1.38629 1.38629
431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
432 28 2.83282 0.35078 2.55365 1.83749 29 C - - <
433 1.38629 1.38629 1.38629 1.38629
434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
435 29 0.53070 2.35068 1.53174 2.29916 30 A - - <
436 1.38629 1.38629 1.38629 1.38629
437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
438 30 2.00633 1.20137 0.98908 1.64602 31 g - - <
439 1.38629 1.38629 1.38629 1.38629
440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
441 31 1.28301 2.25438 0.68949 2.15394 32 G - - <
442 1.38629 1.38629 1.38629 1.38629
443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
444 32 2.39558 0.32068 2.95885 2.02994 33 C - - _
445 1.38629 1.38629 1.38629 1.38629
446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
447 33 2.26593 2.29030 2.76601 0.31181 34 U - - _
448 1.38629 1.38629 1.38629 1.38629
449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
450 34 1.60034 1.99549 1.17547 1.03972 35 u - - _
451 1.38629 1.38629 1.38629 1.38629
452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
453 35 1.01126 1.93561 2.07335 1.00474 36 u - - _
454 1.38629 1.38629 1.38629 1.38629
455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
456 36 0.96800 1.24226 2.10248 1.56411 37 a - - _
457 1.38629 1.38629 1.38629 1.38629
458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
459 37 0.91793 2.28477 1.06301 1.87441 38 a - - _
460 1.38629 1.38629 1.38629 1.38629
461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
462 38 0.96800 1.24226 2.10248 1.56411 39 a - - _
463 1.38629 1.38629 1.38629 1.38629
464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
465 39 2.38672 0.79160 2.07045 1.11225 40 c - - >
466 1.38629 1.38629 1.38629 1.38629
467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
468 40 1.88903 1.08176 1.08725 1.75655 41 c - - >
469 1.38629 1.38629 1.38629 1.38629
470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
471 41 2.53186 1.78457 2.16649 0.44935 42 U - - >
472 1.38629 1.38629 1.38629 1.38629
473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
474 42 2.11226 2.72003 0.30387 2.58756 43 G - - >
475 1.38629 1.38629 1.38629 1.38629
476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
477 43 1.77763 2.35781 0.46620 2.21683 44 G - - >
478 1.38629 1.38629 1.38629 1.38629
479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
480 44 0.23431 2.86460 2.62614 2.53179 45 A - - ,
481 1.38629 1.38629 1.38629 1.38629
482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
483 45 2.30534 3.12204 0.23733 2.69597 46 G - - ,
484 1.38629 1.38629 1.38629 1.38629
485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
486 46 0.91793 2.28477 1.06301 1.87441 47 a - - ,
487 1.38629 1.38629 1.38629 1.38629
488 0.33427 3.73767 1.34581 1.46634 0.26236 1.09861 0.40547
489 47 1.82572 1.94090 2.28977 0.52082 48 U - - ,
490 1.38629 1.38629 1.38629 1.38629
491 0.06440 3.46780 3.46780 1.46634 0.26236 0.16798 1.86670
492 48 2.39558 0.32068 2.95885 2.02994 49 C - - ,
493 1.38629 1.38629 1.38629 1.38629
494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
495 49 2.82007 0.35287 2.54847 1.83555 50 C - - <
496 1.38629 1.38629 1.38629 1.38629
497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
498 50 1.93986 1.65192 0.97340 1.24897 51 g - - <
499 1.38629 1.38629 1.38629 1.38629
500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
501 51 2.34658 2.84349 0.24246 2.79056 52 G - - <
502 1.38629 1.38629 1.38629 1.38629
503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
504 52 1.94038 1.65192 0.97323 1.24894 53 g - - <
505 1.38629 1.38629 1.38629 1.38629
506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
507 53 2.34693 2.84383 0.24235 2.79106 54 G - - <
508 1.38629 1.38629 1.38629 1.38629
509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
510 54 2.26593 2.29030 2.76601 0.31181 55 U - - _
511 1.38629 1.38629 1.38629 1.38629
512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
513 55 2.26593 2.29030 2.76601 0.31181 56 U - - _
514 1.38629 1.38629 1.38629 1.38629
515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
516 56 2.39558 0.32068 2.95885 2.02994 57 C - - _
517 1.38629 1.38629 1.38629 1.38629
518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
519 57 2.30534 3.12204 0.23733 2.69597 58 G - - _
520 1.38629 1.38629 1.38629 1.38629
521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
522 58 0.23431 2.86460 2.62614 2.53179 59 A - - _
523 1.38629 1.38629 1.38629 1.38629
524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
525 59 1.81039 1.10283 2.34106 0.89586 60 u - - _
526 1.38629 1.38629 1.38629 1.38629
527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
528 60 1.81068 1.09350 2.34184 0.90321 61 u - - _
529 1.38629 1.38629 1.38629 1.38629
530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
531 61 3.00308 0.28386 2.67186 2.05286 62 C - - >
532 1.38629 1.38629 1.38629 1.38629
533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
534 62 1.40018 1.07245 1.48219 1.69206 63 c - - >
535 1.38629 1.38629 1.38629 1.38629
536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
537 63 2.99483 0.28498 2.66860 2.05124 64 C - - >
538 1.38629 1.38629 1.38629 1.38629
539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
540 64 1.39930 1.07371 1.48229 1.69078 65 c - - >
541 1.38629 1.38629 1.38629 1.38629
542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
543 65 2.09668 2.70224 0.31051 2.56386 66 G - - >
544 1.38629 1.38629 1.38629 1.38629
545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
546 66 1.29468 1.69346 1.37752 1.23812 67 u - - )
547 1.38629 1.38629 1.38629 1.38629
548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
549 67 0.53113 2.46484 1.46640 2.34049 68 A - - )
550 1.38629 1.38629 1.38629 1.38629
551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
552 68 2.52828 1.78440 2.16542 0.45004 69 U - - )
553 1.38629 1.38629 1.38629 1.38629
554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
555 69 2.54850 0.71164 2.25714 1.11990 70 c - - )
556 1.38629 1.38629 1.38629 1.38629
557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
558 70 1.88844 1.08198 1.08743 1.75627 71 c - - )
559 1.38629 1.38629 1.38629 1.38629
560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
561 71 2.11092 2.71850 0.30443 2.58552 72 G - - )
562 1.38629 1.38629 1.38629 1.38629
563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
564 72 1.40959 1.06246 1.48726 1.69195 73 c - - )
565 1.38629 1.38629 1.38629 1.38629
566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
567 73 0.90952 2.28340 1.07370 1.87338 74 a - - :
568 1.38629 1.38629 1.38629 1.38629
569 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
570 //