Mercurial > repos > big-tiandm > sirna_plant
changeset 6:ccabcc236bb3 draft
Deleted selected files
| author | big-tiandm |
|---|---|
| date | Thu, 23 Oct 2014 22:46:25 -0400 |
| parents | f466394ee1fd |
| children | 6aa0e8d63b17 |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 0 insertions(+), 73 deletions(-) [+] |
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--- a/tool_dependencies.xml Thu Oct 23 22:08:09 2014 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,73 +0,0 @@ -<?xml version="1.0"?> -<tool_dependency> - <package name="fastx_toolkit" version="0.0.13"> - <repository changeset_revision="ec66ae4c269b" name="package_fastx_toolkit_0_0_13" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> - <package name="bowtie" version="0.12.7"> - <repository changeset_revision="9f9f38617a98" name="package_bowtie_0_12_7" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> - <set_environment version="1.0"> - <environment_variable action="set_to" name="SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable> - </set_environment> - <package name="R" version="2.11.0"> - <repository changeset_revision="8d0a55bf7aaf" name="package_r_2_11_0" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> - </package> - - <package name="threads" version="1.96"> - <install version="1.0"> - <actions> - <action type="download_by_url">http://www.cpan.org/authors/id/J/JD/JDHEDDEN/threads-1.96.tar.gz</action> - <action type="shell_command">perl Makefile.PL PREFIX=$INSTALL_DIR </action> - <action type="shell_command">make</action> - <action type="shell_command">make install</action> - <action type="set_environment"> - <environment_variable action="prepend_to" name="PERL5LIB">$INSTALL_DIR/lib</environment_variable> - </action> - </actions> - </install> - </package> - - - <package name="Parallel-ForkManager" version="1.06"> - <install version="1.0"> - <actions> - <action type="download_by_url">http://www.cpan.org/authors/id/S/SZ/SZABGAB/Parallel-ForkManager-1.06.tar.gz</action> - <action type="shell_command">perl Makefile.PL PREFIX=$INSTALL_DIR </action> - <action type="shell_command">make</action> - <action type="shell_command">make install</action> - <action type="set_environment"> - <environment_variable action="prepend_to" name="PERL5LIB">$INSTALL_DIR/lib</environment_variable> - </action> - </actions> - </install> - </package> - - <package name="SVG" version="2.59"> - <install version="1.0"> - <actions> - <action type="download_by_url">http://www.cpan.org/authors/id/S/SZ/SZABGAB/SVG-2.59.tar.gz</action> - <action type="shell_command">perl Makefile.PL PREFIX=$INSTALL_DIR </action> - <action type="shell_command">make</action> - <action type="shell_command">make install</action> - <action type="set_environment"> - <environment_variable action="prepend_to" name="PERL5LIB">$INSTALL_DIR/lib</environment_variable> - </action> - </actions> - </install> - </package> - - <package name="Boost-Graph" version="1.4"> - <install version="1.0"> - <actions> - <action type="download_by_url">http://www.cpan.org/authors/id/D/DB/DBURDICK/BoostGraph/Boost-Graph-1.4.tar.gz</action> - <action type="shell_command">perl Makefile.PL PREFIX=$INSTALL_DIR </action> - <action type="shell_command">make</action> - <action type="shell_command">make install</action> - <action type="set_environment"> - <environment_variable action="prepend_to" name="PERL5LIB">$INSTALL_DIR/lib</environment_variable> - </action> - </actions> - </install> - </package> - -</tool_dependency>