|
0
|
1
|
|
|
2 ---- Running Parameters ----
|
|
|
3 BepiPred-2.0 Threshold : 0.6
|
|
|
4 Min epitope length : 10
|
|
|
5 Max epitope length : 30
|
|
|
6
|
|
|
7 ---- Softwares Threshold ----
|
|
|
8 Emini : 0.8
|
|
|
9 Parker : 0.8
|
|
|
10 Chou Fosman : 0.8
|
|
|
11 Karplus Schulz : 0.8
|
|
|
12 Kolaskar : 0.8
|
|
|
13
|
|
|
14 ---- Proteomes ----
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|
|
15 Alias File
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|
|
16 test_proteom /usr/local/bioinfo/stingrayGalaxy/tools/stingray/epifinder/test-data/proteom.fasta
|
|
|
17
|
|
|
18 ---- Blast ----
|
|
|
19 Identity : 90.0
|
|
|
20 Cover : 90.0
|
|
|
21 Word size : 4
|
|
|
22 Task blastp-short: blastp-short
|
|
|
23
|
|
|
24 ---- Stats ----
|
|
|
25 Processed proteins : 6
|
|
|
26 NGlycosylated proteins : 0
|
|
|
27 Identified epitopes : 3
|
|
|
28 N-glycosylated epitopes: 0
|
