Mercurial > repos > brigidar > snp_to_bed
changeset 2:8220dba15923 draft default tip
drop of first row removed
author | brigidar |
---|---|
date | Mon, 28 Dec 2015 12:51:23 -0500 |
parents | c5195904b225 |
children | |
files | snp_to_bed.xml |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/snp_to_bed.xml Mon Nov 09 14:56:21 2015 -0500 +++ b/snp_to_bed.xml Mon Dec 28 12:51:23 2015 -0500 @@ -1,7 +1,7 @@ <tool id="snp_to_bed" name="snp location to bed format" version="0.3"> <description>convert SNP to interval</description> <command> - cat $input1 | sed '1d'| awk -F "\t" -v OFS="\t" '{print $1, $2-1, $2}'>> $out_file1 </command> + cat $input1| awk -F "\t" -v OFS="\t" '{print $1, $2-1, $2}'>> $out_file1 </command> <inputs> <param name="input1" type="data" label="input file"/> </inputs>