Mercurial > repos > chmaramis > irprofiler

diff public_clonotype_computation.xml @ 1:acaa8e8a0b88 draft default tip

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Uploaded test-data & added tool help
author chmaramis
date Mon, 30 Apr 2018 04:47:52 -0400
parents 0e37e5b73273
children
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--- a/public_clonotype_computation.xml	Fri Mar 30 07:22:29 2018 -0400
+++ b/public_clonotype_computation.xml	Mon Apr 30 04:47:52 2018 -0400
@@ -1,8 +1,8 @@
-<tool id="pubClonoComput" name="Public Clonotypes" version="0.9">
+<tool id="pubClonoComput" name="Public Clonotypes" version="1.0">
     <description>Compute public clonotypes from multiple repertoires</description>
     <requirements>
       <requirement type="package" version="0.19">pandas</requirement>
-    </requirements>
+		</requirements>
     <command interpreter="python">public_clonotype_computation.py "$clonotype" "$output_file" "$Th.thres"
 #for x in $clono_files
   "$x.clfile"
@@ -35,6 +35,6 @@
         <data format="tabular" name="output_file" label="publicClonotypes" />
     </outputs>
     <help>
-Coming soon
+This tool extracts the public (i.e., shared in at least two datasets) clonotypes between 2 or more clonotype repertoires (1st output of the Clonotype Diversity &amp; Expression tool) according to 3 of the 5 supported clonotype definitions.
 </help>
 </tool>