annotate manipulate/minimal_kcf/README_minimal.md @ 0:89592faa2875 draft

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author chrisb
date Wed, 23 Mar 2016 14:35:56 -0400
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1 [TOC]
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3 # rename_kcf.py
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4 This tool reads kcf glycans and removes all additional data which may cause tools to malfunction. For instance REFERENCE, DBLINKS, MASS etc. Only ENTRY, NODE and EDGE entries are kept
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6 ## Works with Galaxy?
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7 Yes. see [minimal_kcf.xml](minimal_kcf.xml)
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9 ## Command line usage
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11 ```
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12 ../../virtualpy/bin/activate
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13 python minimal_kcf.py -i $input -o $kcfoutput
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14 ```
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17 ## Help
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18 ```
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19 ../../virtualpy/bin/activate
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20 python minimal_kcf.py -h
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21 ```
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23 ## Unit Testing?
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24 Yes.
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27 ```
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28 ../../virtualpy/bin/activate
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29 python test_minimal_kcf.py
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30 ```