view cpt_gbk_to_5col/test-data/complex_feature_locs.gbk @ 0:66143811fe8a draft

Uploaded
author cpt
date Fri, 17 Jun 2022 12:45:08 +0000
parents
children
line wrap: on
line source

LOCUS       contig00077              300 bp    DNA     linear       15-MAR-2010
DEFINITION  '[length=22956]'   '[numreads=4517 from AU1189;454 Data]'.
ACCESSION
VERSION
KEYWORDS    .
SOURCE      AU1189
  ORGANISM  AU1189
            Unclassified.
REFERENCE   1  (bases 1 to 22956)
  AUTHORS   Duarte,I.
  TITLE     contig77
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 22956)
  AUTHORS   Duarte,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAR-2010) PLPM, Texas A&M University, 2132 TAMU,
            College Station, TX 77840, USA
FEATURES             Location/Qualifiers
     source          1..22956
                     /organism="AU1189"
                     /mol_type="genomic DNA"
     CDS             complement(join(11159..11327,11327..11652))
                     /note="tapemeasure frameshift chaperone"
                     /product="P2 E' tapemeasure frameshift chaperone"
                     /translation="MNPIQSDAAAPDLQADAAAIATPAQDDPATHTLDTPLVRGTQTITSITLRKPKSGELRGV
                     SLSDLVSLDVVALSKVLPRISSPMLTEADVASIDPADLVQLGGIFAGFFDAEGREIPTGL
                     PDRVEDPMADIATVFGWTPPVMDAFSLAELMDWRERARVRAGAQ"
                     /gene="gp14"
     CDS             complement(join(11409..11600,11600..11900))
     RBS             complement(11905..11910)
BASE COUNT     3240 a   7606 c   8254 g   3856 t
ORIGIN
        1 agccgggcgc gccaagcctg atcaggctct cagcggtttc ctcccatcgt cgtgcagtac
       61 cgttgcagct aaattgcagc cggaatcggc gcgggctcgg ccgtcagcgg cgcgacccat
      121 tgcgccagat gcgcggccga cagatgcgcg taccgctgca ccatttccat cgtctcccag
      181 ccgcccagct ccttcagcac ctgcagcggc gtgccgcgtt ggacgtgcca gctcgcccag
      241 gtgtggcgca ggtcgtgcca gcggaaatcg tgcaggccgg cgcgccgcag cgccttggcc
//