Mercurial > repos > dawe > srf2fastq
comparison srf2fastq/io_lib-1.12.2/tests/srf2fastq.test @ 0:d901c9f41a6a default tip
Migrated tool version 1.0.1 from old tool shed archive to new tool shed repository
| author | dawe |
|---|---|
| date | Tue, 07 Jun 2011 17:48:05 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:d901c9f41a6a |
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| 1 #!/bin/sh | |
| 2 $top_builddir/progs/srf2fastq $srcdir/data/proc.srf > $outdir/slx.fastq | |
| 3 cmp $outdir/slx.fastq $srcdir/data/slx.fastq || exit 1 | |
| 4 $top_builddir/progs/srf2fastq -C $srcdir/data/proc.srf > $outdir/slx.fastq | |
| 5 cmp $outdir/slx.fastq $srcdir/data/slx-C.fastq || exit 1 | |
| 6 | |
| 7 $top_builddir/progs/srf2fastq $srcdir/data/raw.srf > $outdir/slx.fastq | |
| 8 cmp $outdir/slx.fastq $srcdir/data/slx.fastq || exit 1 | |
| 9 $top_builddir/progs/srf2fastq -C $srcdir/data/raw.srf > $outdir/slx.fastq | |
| 10 cmp $outdir/slx.fastq $srcdir/data/slx-C.fastq || exit 1 | |
| 11 | |
| 12 $top_builddir/progs/srf2fastq $srcdir/data/both.srf > $outdir/slx.fastq | |
| 13 cmp $outdir/slx.fastq $srcdir/data/slx.fastq || exit 1 | |
| 14 $top_builddir/progs/srf2fastq -C $srcdir/data/both.srf > $outdir/slx.fastq | |
| 15 cmp $outdir/slx.fastq $srcdir/data/slx-C.fastq || exit 1 |