Mercurial > repos > dcouvin > pmlst_v2

annotate pmlst/pmlst_db/config @ 0:cfab64885f66 draft default tip

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author dcouvin
date Mon, 06 Sep 2021 18:27:45 +0000
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1 # Database configuration file - Describes the content of the database
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2 # Each db consist of 3 files with the following extensions: fsa, clpx, txt.clean
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3 # Other important files are: noGenes.txt
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4 #db_prefix name allele_lst
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5 incac IncA/C PMLST repA,parA,parB,A053
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6 incf IncF RST FII,FIC,FIIK,FIIS,FIIY,FIA,FIB
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7 inchi1 IncHI1 MLST HCM1_043,HCM1_064,HCM1_099,HCM1_116,HCM1_178ac,HCM1_259
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8 inchi2 IncHI2 DLST smr0018,smr0199
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9 inci1 IncI1 MLST repI1,ardA,trbA,sogS,pilL
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10 incn IncN MLST repN,traJ,korA
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11 pbssb1-family pBSSB1-family higB,mqsA,soj