|
0
|
1 * Problem when using __setitem__ in the TableResults object instead of the add_table method:
|
|
|
2 tr = TableResults("software X", "6.6.6", "20200128", "runsoft -i arg",
|
|
|
3 "sampleX")
|
|
|
4 tr["some table"]
|
|
|
5
|
|
|
6
|
|
|
7 * Table merge function should implement the copy argument.
|
|
|
8
|
|
|
9 * Table add_table function should implement the copy argument so that the added table will be copied instead of referenced.
|
|
|
10
|
|
|
11 * SortList entries does not get updated when the corresponding value in the Table object is changed.
|
|
|
12
|
|
|
13
|
|
|
14 REQUIRES ATTENTION SOON:
|
|
|
15 * from testdata Salmonella Agone using raw reads / KMA, results_tab.txt etc. does not report the mdf(A) gene (18% ID), but the Table.as_txt method does.
|
|
|
16 * Test two genes on same contig
|
|
|
17 * cge.phenotype2genotype.feature exists twice also in cge.feature, only one copy should persist
|
